DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht2 and cht-1

DIOPT Version :9

Sequence 1:NP_001246550.1 Gene:Cht2 / 38223 FlyBaseID:FBgn0022702 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_508588.1 Gene:cht-1 / 180628 WormBaseID:WBGene00000503 Length:617 Species:Caenorhabditis elegans


Alignment Length:407 Identity:129/407 - (31%)
Similarity:205/407 - (50%) Gaps:46/407 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ARTGPLHDKVVVCYVSTWAVYRPEQGAYAIENFDPNLCTHVVYAFAGLDITQAAIKSLDPWQDLK 97
            ||:.|.:..:..||.:.||.||..:..:..|::.|.||||:::||..:: ....:::.|| .||.
 Worm    45 ARSEPTNSYIRPCYFTNWAQYRQGRAKFVPEDYTPGLCTHILFAFGWMN-ADYTVRAYDP-ADLP 107

  Fly    98 EEY-GKGGYEKMTGLKRSHPHLKVSLAIGGWNEGSANYSTLVANNLLRGRFVKQVSSFIRKYNFD 161
            .:: |:|.|.::..||.:...||..|:.|||:.|:|.:..:.|::..|..|:....:|:|.:.||
 Worm   108 NDWAGEGMYRRVNKLKVTDTQLKTLLSFGGWSFGTALFQGMAASSASRKVFIDSAITFVRTWGFD 172

  Fly   162 GLDLDWEYPTQRKGKPADRENFVLLTKELREEFDEHG-------LLLTSAIGASKKVIDEAYDVR 219
            |:|:|||||:    ...|..|:|.|.|||:...:...       ||:|:|:.|....||..||:.
 Worm   173 GIDIDWEYPS----GATDMANYVALVKELKAACESEAGSTGKDRLLVTAAVAAGPATIDAGYDIP 233

  Fly   220 QISRYLDYLHIMCYDYHGSWDRRVGYNAPLTAPADDPL-----SVKFSIDYLLKLGAPPEKLVMG 279
            .::...|::.:|.||:.|:|...||:|:||.|..:.|.     :|..|..|..:.|.|.||:::|
 Worm   234 NLAPNFDFILLMSYDFFGAWASLVGFNSPLYATTELPAEWNGWNVDSSARYWNQKGMPKEKIIVG 298

  Fly   280 LPFYGRTFKTLASGFLNDVSEGVGFK-GPYTREDGFLGYNEICQTLSNQTSGWTREWDPQTSQVL 343
            :|.|||.:....:..:|..:.|...| ..|.:|.|...|.|.|:.|:|   |.||.||.| |||.
 Worm   299 MPTYGRGWTLNNASAINPGTSGSPAKITQYVQEAGVGAYFEFCEMLAN---GATRYWDSQ-SQVP 359

  Fly   344 AKSERNVFTQEINVVTYDSSRSIANKVLFAMSKRLAGVMVWSVDTDDFLGNCKLDEDTYEDFQKV 408
            ...:.|.:.      :||...|.|||:.:...:...|..||::|.|||...|.            
 Worm   360 YLVQGNQWW------SYDDEESFANKMAYVKREGYGGAFVWTLDFDDFNAGCS------------ 406

  Fly   409 TAAPKRSSQNYPLLRTI 425
                ..:.|.|||:..|
 Worm   407 ----NSNGQLYPLISVI 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht2NP_001246550.1 Glyco_18 42..389 CDD:214753 117/360 (33%)
GH18_chitolectin_chitotriosidase 43..428 CDD:119351 126/397 (32%)
cht-1NP_508588.1 GH18_chitolectin_chitotriosidase 55..423 CDD:119351 126/397 (32%)
Glyco_18 57..399 CDD:214753 117/357 (33%)
CBM_14 481..532 CDD:279884
CBM_14 567..615 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.910

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