DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht2 and cht-3

DIOPT Version :10

Sequence 1:NP_477298.2 Gene:Cht2 / 38223 FlyBaseID:FBgn0022702 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_501082.2 Gene:cht-3 / 177464 WormBaseID:WBGene00016084 Length:1067 Species:Caenorhabditis elegans


Alignment Length:429 Identity:82/429 - (19%)
Similarity:158/429 - (36%) Gaps:124/429 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 VCYVSTWAVYRPE--QGAYAIENFDPNLCTHVVYAFAGLDIT---------QAAIKSLDPWQDLK 97
            :||:.      ||  :..:.|:|...:.|:|:|..:..||::         :..:|.:|.|:...
 Worm   375 LCYLD------PEEVEETFPIDNLKSDYCSHIVVPYFALDLSDKMIEEDKAEDLVKKIDDWRSKI 433

  Fly    98 EEYGKGGYEKMTGLKRSHPHLKVSLAIGGWNEGSANYSTLVANNLLRGRFVKQVSSFIRKYNFDG 162
            .|..              |.|.:|:   |..:.|..:..|:.|:..|....:.:...|...|.||
 Worm   434 VEVA--------------PRLILSV---GSKQASTIWQFLLGNDFHRKELAEGLVKAINSTNADG 481

  Fly   163 LDLDWEYPTQRKGKPADRENFVLLTKELREEFDEHGL--LLTSAIGA-SKKVIDEAYDVRQISRY 224
            |::.|                  .::.:..:||:..|  .:...:.| :.|:::......|.|.|
 Worm   482 LEISW------------------TSQPMVSDFDKKNLKSFINDIVAADTAKMVEIVVATSQQSAY 528

  Fly   225 LDYLHIMCYDY-----------------HGSWDRRVGYNAPLTAPA---DDPLSVKFSIDYLLKL 269
            .|:     |||                 |.......|:.:||.|.:   :..:|.:..:.:.::.
 Worm   529 SDF-----YDYEHLNKTASLIVLHSHRLHSDSLPFTGHPSPLRATSSMTNQKMSWESLLSHWVEK 588

  Fly   270 GAPPEKLVMGLPFYGRTFKTLASGFLNDVSEGVGFKGPY----------TREDGFLGYNEICQTL 324
            ...|.|||:.|     :..||:...|.||.....  .|:          :::.......|||::|
 Worm   589 RVLPSKLVLSL-----SASTLSMQSLADVRSSAA--TPFGQSAFVSMLRSKKGDIHSQQEICESL 646

  Fly   325 SNQTSGWTREWDPQTSQVLAKSERNVFTQEINVVTYDSSRSIANKVLFAMSKRLAGVMVWSVDTD 389
            .:.| |.|...|......|.:.::        :|.|:::||...|.::|..:.:.|:.:.::..|
 Worm   647 KSGT-GVTHWVDGAEVPYLRRYDQ--------MVAYENTRSAHIKAVWASMEGVGGLALHNMHQD 702

  Fly   390 DFLGNCKLDEDTYEDFQKVTAAPKRSSQNYPLLRTINEA 428
            |....|  |..|                .:|:|..::.|
 Worm   703 DPSAVC--DNRT----------------AFPILNALSRA 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht2NP_477298.2 GH18_chitolectin_chitotriosidase 43..428 CDD:119351 81/427 (19%)
cht-3NP_501082.2 Glyco_18 51..334 CDD:214753
Glyco_18 375..702 CDD:214753 74/388 (19%)
Glyco_hydro_18 760..1043 CDD:425828
Blue background indicates that the domain is not in the aligned region.

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