DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht2 and cht-3

DIOPT Version :9

Sequence 1:NP_001246550.1 Gene:Cht2 / 38223 FlyBaseID:FBgn0022702 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_501082.2 Gene:cht-3 / 177464 WormBaseID:WBGene00016084 Length:1067 Species:Caenorhabditis elegans


Alignment Length:429 Identity:82/429 - (19%)
Similarity:158/429 - (36%) Gaps:124/429 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 VCYVSTWAVYRPE--QGAYAIENFDPNLCTHVVYAFAGLDIT---------QAAIKSLDPWQDLK 97
            :||:.      ||  :..:.|:|...:.|:|:|..:..||::         :..:|.:|.|:...
 Worm   375 LCYLD------PEEVEETFPIDNLKSDYCSHIVVPYFALDLSDKMIEEDKAEDLVKKIDDWRSKI 433

  Fly    98 EEYGKGGYEKMTGLKRSHPHLKVSLAIGGWNEGSANYSTLVANNLLRGRFVKQVSSFIRKYNFDG 162
            .|..              |.|.:|:   |..:.|..:..|:.|:..|....:.:...|...|.||
 Worm   434 VEVA--------------PRLILSV---GSKQASTIWQFLLGNDFHRKELAEGLVKAINSTNADG 481

  Fly   163 LDLDWEYPTQRKGKPADRENFVLLTKELREEFDEHGL--LLTSAIGA-SKKVIDEAYDVRQISRY 224
            |::.|                  .::.:..:||:..|  .:...:.| :.|:::......|.|.|
 Worm   482 LEISW------------------TSQPMVSDFDKKNLKSFINDIVAADTAKMVEIVVATSQQSAY 528

  Fly   225 LDYLHIMCYDY-----------------HGSWDRRVGYNAPLTAPA---DDPLSVKFSIDYLLKL 269
            .|:     |||                 |.......|:.:||.|.:   :..:|.:..:.:.::.
 Worm   529 SDF-----YDYEHLNKTASLIVLHSHRLHSDSLPFTGHPSPLRATSSMTNQKMSWESLLSHWVEK 588

  Fly   270 GAPPEKLVMGLPFYGRTFKTLASGFLNDVSEGVGFKGPY----------TREDGFLGYNEICQTL 324
            ...|.|||:.|     :..||:...|.||.....  .|:          :::.......|||::|
 Worm   589 RVLPSKLVLSL-----SASTLSMQSLADVRSSAA--TPFGQSAFVSMLRSKKGDIHSQQEICESL 646

  Fly   325 SNQTSGWTREWDPQTSQVLAKSERNVFTQEINVVTYDSSRSIANKVLFAMSKRLAGVMVWSVDTD 389
            .:.| |.|...|......|.:.::        :|.|:::||...|.::|..:.:.|:.:.::..|
 Worm   647 KSGT-GVTHWVDGAEVPYLRRYDQ--------MVAYENTRSAHIKAVWASMEGVGGLALHNMHQD 702

  Fly   390 DFLGNCKLDEDTYEDFQKVTAAPKRSSQNYPLLRTINEA 428
            |....|  |..|                .:|:|..::.|
 Worm   703 DPSAVC--DNRT----------------AFPILNALSRA 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht2NP_001246550.1 Glyco_18 42..389 CDD:214753 74/388 (19%)
GH18_chitolectin_chitotriosidase 43..428 CDD:119351 81/427 (19%)
cht-3NP_501082.2 Glyco_18 51..334 CDD:214753
GH18_chitinase-like 51..>103 CDD:299167
Glyco_18 375..702 CDD:214753 74/388 (19%)
GH18_chitinase-like 387..723 CDD:299167 77/409 (19%)
Glyco_hydro_18 761..1043 CDD:279094
GH18_chitinase-like <1018..1062 CDD:299167
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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