DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht2 and chil-21

DIOPT Version :9

Sequence 1:NP_001246550.1 Gene:Cht2 / 38223 FlyBaseID:FBgn0022702 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_496029.2 Gene:chil-21 / 174502 WormBaseID:WBGene00011164 Length:470 Species:Caenorhabditis elegans


Alignment Length:409 Identity:91/409 - (22%)
Similarity:172/409 - (42%) Gaps:72/409 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 TASSLWASVAARTGP----LHDKVVVCYVSTWAVYRPEQGAYAIENFDPNLCTHVVYAFAGLDIT 83
            |.:|:.::|||.|.|    .:.:::..|.:|        ....|.....:..||.|:||..:   
 Worm    88 TVTSISSTVAASTYPATPGCNKRIIGYYFAT--------QTSVITRDQVSKLTHAVFAFVNM--- 141

  Fly    84 QAAIKSLDPWQDLKEEYGKGGYEKMTGL-KRSHPHLKVSLAIGGWNEGSANYSTLVANNLLRGRF 147
                 :.|....:..:..|..:..:..: |:..|.:||.::||| |:.|.|:..::::...:..|
 Worm   142 -----TSDGHLQIDGDLAKNRFTNLIEIAKQQTPQVKVMISIGG-NDNSNNFKPVLSSPDRKKLF 200

  Fly   148 VKQVSSFIRKYNFDGLDLDWEYPTQRKGKPADRENFVLLTKELREEFDEHG-------LLLTSAI 205
            :....||::.|:.||:||.|::|    || ..::.:.....:||.......       :|....:
 Worm   201 INSTVSFLQTYDIDGVDLYWKWP----GK-TSKDIYSQFINDLRYSLQRQKRNYIMSIVLPPPDM 260

  Fly   206 GASKKVIDEAYDVRQISRYLDYLHIMCYDYHGSWDRRVG---------YNAPLTAPADDPLSVKF 261
            ||:   .:...|:..|...:|:|:|....|.|.|....|         :|.....|.....::..
 Worm   261 GAN---YEAGIDIENIFDNVDFLNIFTMGYFGPWQNDAGMITGAASQLFNGVNGVPGRKTYNIHH 322

  Fly   262 SID-YLLKLGAPPEKLVMGLPFYGRTFKTLASGFLN----DVSEGVGFKGPYTREDGFLGYNEIC 321
            |.: |:.|.| ..:|..:.:|||...:|.: .|.:|    ::.....|:|      |.:|...:.
 Worm   323 STERYVCKTG-QSDKYNIAIPFYTMLWKHV-KGPVNPPNIEIYRNATFQG------GVVGETSMS 379

  Fly   322 QTLSNQTSGWTREWDPQTSQVLAKSERNVFTQEINVVTYDSSRSIANKVLFAMSKRLAGVMVWSV 386
            :.|. |..|:.........::.|..:.|..|:  ..:|::::.:||.|:.:...:.|.||.:|:|
 Worm   380 RKLV-QEEGYDFSNPTYNPEIRAAFKYNATTE--TFLTFETNDTIAAKIDYVKDRILGGVWIWAV 441

  Fly   387 DTDD----------FLGNC 395
            |.||          |.|.|
 Worm   442 DMDDDSNNLLNLVKFTGYC 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht2NP_001246550.1 Glyco_18 42..389 CDD:214753 79/368 (21%)
GH18_chitolectin_chitotriosidase 43..428 CDD:119351 84/385 (22%)
chil-21NP_496029.2 Glyco_18 110..444 CDD:214753 79/369 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D369121at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.