DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht2 and cht-2

DIOPT Version :9

Sequence 1:NP_001246550.1 Gene:Cht2 / 38223 FlyBaseID:FBgn0022702 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_495798.2 Gene:cht-2 / 174363 WormBaseID:WBGene00011757 Length:626 Species:Caenorhabditis elegans


Alignment Length:492 Identity:132/492 - (26%)
Similarity:219/492 - (44%) Gaps:114/492 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LWLLLLLASTASSLWASV--AARTGPLHDKVV----VCYVSTWAVYRPEQGAYAIENFDPNLCTH 72
            :|:.|.:      :|.:|  ....|.:.|:..    |.|:::|       |.:...:......||
 Worm     5 MWMWLFV------VWITVLFGVSNGGILDRSCGRRRVGYITSW-------GKHPFRDDQAEKLTH 56

  Fly    73 VVYAFAGLDITQAAIKSLDPWQDLKEEYGKGGYEKMTGLKRSHPHLKVSLAIGGWNEGSANYSTL 137
            :|:||..:| :..::|       |:.:..|...|.:..:...||.||:..|:||| |.|..:|.|
 Worm    57 LVFAFFVVD-SDGSVK-------LEGDAAKARLEHVKEVASRHPDLKLLYAVGGW-ENSQYFSVL 112

  Fly   138 VANNLLRGRFVKQVSSFIRKYNFDGLDLDWEYPTQR---KGKPADRENFVLLTKELREEF----D 195
            .|::..|...:......|::|.|||:|:|||||...   :|.||||.|:|.|.:|||.|.    .
 Worm   113 TADHSRRSILISNFVKVIKEYGFDGVDIDWEYPVTGGAVEGTPADRRNYVNLMRELRNELRDLES 177

  Fly   196 EHG--LLLTSAIGASKKVIDEAYDVRQISRYLDYLHIMCYDYHGSWDRRVG-YNAPLTAPADDPL 257
            |.|  .|::.|..|...|:...||::|:.:|.|::::|.|||.|:|..:.| |..| .||....:
 Worm   178 ETGKSYLISFAGAAGHWVLKPGYDLQQLMKYCDFVNVMSYDYFGAWASKWGAYTGP-PAPLQFAM 241

  Fly   258 SVKFS---------IDYLLKLGAPPEKLVMGLPFYGRTFKTL--ASGFLNDV--------SEGVG 303
            ..|||         .||..::.| .:|:.||:|||||.:|.:  |....:|:        |||..
 Worm   242 PKKFSGRMNVHATMKDYSCQIKA-TDKINMGVPFYGRFWKNVGDAVDSTDDMWRTATATNSEGTK 305

  Fly   304 FKGPYTREDGFLGYNEICQTLSNQTSGWTREWDPQTSQVLAKSERNVFTQEINVVTYDSSRSIAN 368
            |:|      |.:.:.::.:......   |:......:..:..||:..|      |.|:::.|:.:
 Worm   306 FEG------GDVQWRDLHEKFDTTK---TKFHSGSKTPFIWLSEQKTF------VGYENAESLKH 355

  Fly   369 KVLFAMSKRLAGVMVWSVDTDDFLG---------------------NCKLDED----TYEDFQKV 408
            ||.:.:...:.|||:|::|.||..|                     .|...:|    ||:|.:::
 Worm   356 KVDYIVENNIGGVMIWAIDFDDDQGTLLNSAAAESICTTSTKSFNYKCSPVDDKRWWTYDDNEEL 420

  Fly   409 TAAPKRSSQNYPLLRTINEATMLAVDELAVPEPQPDD 445
            .....:||   ||:            :...|...|||
 Worm   421 AGMCGKSS---PLI------------DGYYPVCDPDD 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht2NP_001246550.1 Glyco_18 42..389 CDD:214753 110/379 (29%)
GH18_chitolectin_chitotriosidase 43..428 CDD:119351 122/442 (28%)
cht-2NP_495798.2 Glyco_18 33..376 CDD:214753 110/375 (29%)
GH18_chitinase-like 35..376 CDD:299167 110/373 (29%)
ChtBD1_GH18_2 418..469 CDD:211315 8/40 (20%)
ChtBD1_GH18_2 496..547 CDD:211315
ChtBD1_GH18_2 567..618 CDD:211315
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D369121at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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