DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht2 and si:ch211-226m16.2

DIOPT Version :9

Sequence 1:NP_001246550.1 Gene:Cht2 / 38223 FlyBaseID:FBgn0022702 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_001191302.1 Gene:si:ch211-226m16.2 / 100003708 ZFINID:ZDB-GENE-030131-2302 Length:410 Species:Danio rerio


Alignment Length:352 Identity:73/352 - (20%)
Similarity:132/352 - (37%) Gaps:112/352 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 CTHVVYAFAGLDITQAAIKSLDPWQDLKEEYGKGGYEKMTGLKRSHPHLKVSLAIGGWNEGSANY 134
            |||::......| .:..::||.          :..|:.:..:|..:..||:.|   |....|:..
Zfish    41 CTHIILPSVSSD-DELYLQSLT----------ENEYDAIQRMKERNSALKILL---GLEIKSSRL 91

  Fly   135 STLVANNLLRGRFVKQVSSFIRKYNFDGLDLDWEYPTQRKGKPADRENFVLLTKELREEFDE--H 197
            ..:.||....|.|::.:.:::::...||||:.|     ..|.|:|.|.|....|.::..|:|  .
Zfish    92 KLMSANEASVGSFIQTLLTYLKEKRLDGLDVIW-----LDGTPSDTELFTDFLKSIKGVFEEEMR 151

  Fly   198 GLLLTSAIGASKKVIDE---AYDVRQISRYLDYLHIMCYDYHGSWDRRVGYNAPLTAPADDPLSV 259
            .|||::::   |:..|:   :||.:.:|:|:|::.|:                |.....|.....
Zfish   152 PLLLSASV---KEPTDKTVASYDEQILSQYVDFISIL----------------PAQLQTDGQYIS 197

  Fly   260 KFS-------IDYLLKLGAPPEKLVMGLPFYGRTFKTLASGFL---------------NDVSEGV 302
            |.:       :| |.|||     |||             .|||               :|.:...
Zfish   198 KTAQHWQDKQVD-LQKLG-----LVM-------------PGFLQRSRHRHHHRNHPKHDDTTAEE 243

  Fly   303 GFKGPYTREDGFLGYNEICQTLSNQTSGWTREWDPQTSQVLAKSERNVFTQEINVVTYDSSRSIA 367
            |.|......:.:|| :::||.:.   ||                       ::..:|..|.....
Zfish   244 GKKDHVHLLNLYLG-DQVCQAVK---SG-----------------------QLQFITLTSVSDEQ 281

  Fly   368 NKVLFAMSKRLAGVMVWSVDTDDFLGN 394
            :.:...:.:...|:.|..:|.|.| ||
Zfish   282 SPIKEVLQQGFGGIGVVLIDLDVF-GN 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht2NP_001246550.1 Glyco_18 42..389 CDD:214753 69/345 (20%)
GH18_chitolectin_chitotriosidase 43..428 CDD:119351 73/352 (21%)
si:ch211-226m16.2NP_001191302.1 GH18_chitinase-like 41..>185 CDD:324582 40/165 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.