DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk2 and glpK

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_418361.1 Gene:glpK / 948423 ECOCYCID:EG10398 Length:502 Species:Escherichia coli


Alignment Length:501 Identity:216/501 - (43%)
Similarity:305/501 - (60%) Gaps:16/501 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IDEGTKTIGFSIYTTPDFKEIAAHRVELSVITPQDGWYEQDPLEMMASINKCAEEAIKQLPEQGF 100
            :|:|| |...::....|...|:..:.|...|.|:.||.|.||:|:.|:.:....|.   |.:...
E. coli    10 LDQGT-TSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEV---LAKADI 70

  Fly   101 SASDIVTVGITNQRETTIVWDAVTGKPLYNALLWKDIRTSTTVEQIVAK-VQDPNHFRSSTGLPI 164
            |:..|..:||||||||||||:..||||:|||::|:..||:...|.:... ::|  :.||:|||.|
E. coli    71 SSDQIAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLED--YIRSNTGLVI 133

  Fly   165 STYFSALKIRWLRDNVPEVRQAIRERRCKAGTVDSWIVWNLTNGALHITDVTNASRTLLMNLETQ 229
            ..|||..|::|:.|:|...|:..|......||||:|::|.:|.|.:|:||.||||||:|.|:.|.
E. coli   134 DPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTL 198

  Fly   230 AWDPVLLKTFGIREEMLPTIHSCSEIFGKITSERSPLRGMTLSGIMGNQQASLLGQMCVKPGQTK 294
            .||..:|:...|..||||.:...||::|:..........:.:|||.|:|||:|.||:|||.|..|
E. coli   199 DWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIGGKGGTRIPISGIAGDQQAALFGQLCVKEGMAK 263

  Fly   295 NTYRSGCFLLCNTGDKPVFSRHGLLTTVAYKLGPQAPTIYAIEGAVSVAGHALSWLQNKVRILPD 359
            |||.:|||:|.|||:|.|.|.:|||||:|  .||.....||:||||.:||.::.||:::::::.|
E. coli   264 NTYGTGCFMLMNTGEKAVKSENGLLTTIA--CGPTGEVNYALEGAVFMAGASIQWLRDEMKLIND 326

  Fly   360 SRDAEKYAEMVPTSGDVYFVPAFTGLYAPYWRQNARGIIIGLTQFTRKNHIVRAALESICFQTRD 424
            :.|:|.:|..|..:..||.|||||||.||||...|||.|.|||:....|||:||.||||.:||||
E. coli   327 AYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRD 391

  Fly   425 ILECMHQECGYEINKLHADGKLTTNNLLMQLQADTIGMPVFRSQLMDSTAFGAAMCAAQADGV-- 487
            :||.|..:.|..::.|..||....||.|||.|:|.:|..|.|.::.:.||.|||..|..|.|.  
E. coli   392 VLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQ 456

  Fly   488 NLCQFEPEKRYYENVHYDTFLATTTDVERKERYGKWKRAVERSLGW 533
            ||.:.: ||...|. .:...:.||   ||..||..||:||:|::.|
E. coli   457 NLDELQ-EKAVIER-EFRPGIETT---ERNYRYAGWKKAVKRAMAW 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 215/499 (43%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 215/499 (43%)
glpKNP_418361.1 glpK 1..498 CDD:234594 216/501 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 195 1.000 Domainoid score I120
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 1 1.000 - -
Inparanoid 1 1.050 410 1.000 Inparanoid score I43
OMA 1 1.010 - - QHG60628
OrthoFinder 1 1.000 - - FOG0001035
OrthoInspector 1 1.000 - - otm51314
orthoMCL 1 0.900 - - OOG6_100613
Panther 1 1.100 - - O PTHR10196
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1107
SwiftOrtho 00.000 Not matched by this tool.
1110.870

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