DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk2 and lsrK

DIOPT Version :10

Sequence 1:NP_647655.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_416028.3 Gene:lsrK / 946069 ECOCYCID:G6798 Length:530 Species:Escherichia coli


Alignment Length:549 Identity:128/549 - (23%)
Similarity:217/549 - (39%) Gaps:99/549 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IDEGTKTIGFSIYTTPDFKEIAAHRVELSVITPQDGWYEQDPLEMMASINK---CAEEAIKQ-LP 96
            :|.||.:|...|:.. :..:||..:.|...:...|     .|..|...:||   .|.|.::| |.
E. coli    17 LDAGTGSIRAVIFDL-EGNQIAVGQAEWRHLAVPD-----VPGSMEFDLNKNWQLACECMRQALH 75

  Fly    97 EQGFSASDIVTVGITNQRETTIVWDAVTGKPLYN---ALLWK----DIRTSTTVEQIVAKVQDPN 154
            ..|.:...|..|...:.||         |..|||   |.:|.    |.|.:..|.::  |....|
E. coli    76 NAGIAPEYIAAVSACSMRE---------GIVLYNNEGAPIWACANVDARAAREVSEL--KELHNN 129

  Fly   155 HFRS----STGLPISTYFSAL-KIRWLRDNVPEVRQAIRERRCKAGTVDSWIVWNLTNGALHITD 214
            .|.:    :||..::  .||: ::.||..:    |..|..:......:..|:.:.| :|.|.: |
E. coli   130 TFENEVYRATGQTLA--LSAIPRLLWLAHH----RSDIYRQASTITMISDWLAYML-SGELAV-D 186

  Fly   215 VTNASRTLLMNLETQAWDPVLLKTFGIREEMLPTIHSCSEIFGKITSERSPLRGM------TLSG 273
            .:||..|.|::|.|:.|.|.||...|:|.::|..:.....:.|.::|:.:.|.|:      .:.|
E. coli   187 PSNAGTTGLLDLTTRDWKPALLDMAGLRADILSPVKETGTLLGVVSSQAAELCGLKAGTPVVVGG 251

  Fly   274 IMGNQQASLLGQMCVKPGQTKNTYRSGCFLLCNTGDKPVFSRHGLLT--TVAYKLGPQA-PTIYA 335
              |:.|...||...|:|.||.        :|..|..:.|.:....:|  .:..::.|.. |.:..
E. coli   252 --GDVQLGCLGLGVVRPAQTA--------VLGGTFWQQVVNLAAPVTDPEMNVRVNPHVIPGMVQ 306

  Fly   336 IEGAVSVAGHALSWLQN----KVRILPDSRDAEKY------AEMVPTSGDVYFVPAFTG-LYAPY 389
            .|......|..:.|.::    :.:::.:....:.|      |..|| .|....:|.|:. :....
E. coli   307 AESISFFTGLTMRWFRDAFCAEEKLIAERLGIDTYTLLEEMASRVP-PGSWGVMPIFSDRMRFKT 370

  Fly   390 WRQNARGIIIGLT---QFTRKNHIVRAALESICFQTRDILECMHQECGYEINKLHAD-----GKL 446
            | .:|....|.|:   ....|..:.||..|:...    :..|..|:.. :.:.:|..     |..
E. coli   371 W-YHAAPSFINLSIDPDKCNKATLFRALEENAAI----VSACNLQQIA-DFSNIHPSSLVFAGGG 429

  Fly   447 TTNNLLMQLQADTIGMPVFRSQLMDSTAFGAAMCAAQADGVNLCQFEPEKRY--YENVHYDTFLA 509
            :...|..|:.||..|:||....:.::||.|.|:.|....|:.....|..:|.  :|..|      
E. coli   430 SKGKLWSQILADVSGLPVNIPVVKEATALGCAIAAGVGAGIFSSMAETGERLVRWERTH------ 488

  Fly   510 TTTDVERKERY----GKWKRAVERSLGWV 534
             |.|.|:.|.|    .||:...:..||.|
E. coli   489 -TPDPEKHELYQDSRDKWQAVYQDQLGLV 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_647655.1 glycerol_kin 31..533 CDD:273549 126/546 (23%)
lsrKNP_416028.3 PRK10939 10..530 CDD:182853 128/549 (23%)

Return to query results.
Submit another query.