DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk2 and lsrK

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_416028.3 Gene:lsrK / 946069 ECOCYCID:G6798 Length:530 Species:Escherichia coli


Alignment Length:549 Identity:128/549 - (23%)
Similarity:217/549 - (39%) Gaps:99/549 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IDEGTKTIGFSIYTTPDFKEIAAHRVELSVITPQDGWYEQDPLEMMASINK---CAEEAIKQ-LP 96
            :|.||.:|...|:.. :..:||..:.|...:...|     .|..|...:||   .|.|.::| |.
E. coli    17 LDAGTGSIRAVIFDL-EGNQIAVGQAEWRHLAVPD-----VPGSMEFDLNKNWQLACECMRQALH 75

  Fly    97 EQGFSASDIVTVGITNQRETTIVWDAVTGKPLYN---ALLWK----DIRTSTTVEQIVAKVQDPN 154
            ..|.:...|..|...:.||         |..|||   |.:|.    |.|.:..|.::  |....|
E. coli    76 NAGIAPEYIAAVSACSMRE---------GIVLYNNEGAPIWACANVDARAAREVSEL--KELHNN 129

  Fly   155 HFRS----STGLPISTYFSAL-KIRWLRDNVPEVRQAIRERRCKAGTVDSWIVWNLTNGALHITD 214
            .|.:    :||..::  .||: ::.||..:    |..|..:......:..|:.:.| :|.|.: |
E. coli   130 TFENEVYRATGQTLA--LSAIPRLLWLAHH----RSDIYRQASTITMISDWLAYML-SGELAV-D 186

  Fly   215 VTNASRTLLMNLETQAWDPVLLKTFGIREEMLPTIHSCSEIFGKITSERSPLRGM------TLSG 273
            .:||..|.|::|.|:.|.|.||...|:|.::|..:.....:.|.::|:.:.|.|:      .:.|
E. coli   187 PSNAGTTGLLDLTTRDWKPALLDMAGLRADILSPVKETGTLLGVVSSQAAELCGLKAGTPVVVGG 251

  Fly   274 IMGNQQASLLGQMCVKPGQTKNTYRSGCFLLCNTGDKPVFSRHGLLT--TVAYKLGPQA-PTIYA 335
              |:.|...||...|:|.||.        :|..|..:.|.:....:|  .:..::.|.. |.:..
E. coli   252 --GDVQLGCLGLGVVRPAQTA--------VLGGTFWQQVVNLAAPVTDPEMNVRVNPHVIPGMVQ 306

  Fly   336 IEGAVSVAGHALSWLQN----KVRILPDSRDAEKY------AEMVPTSGDVYFVPAFTG-LYAPY 389
            .|......|..:.|.::    :.:::.:....:.|      |..|| .|....:|.|:. :....
E. coli   307 AESISFFTGLTMRWFRDAFCAEEKLIAERLGIDTYTLLEEMASRVP-PGSWGVMPIFSDRMRFKT 370

  Fly   390 WRQNARGIIIGLT---QFTRKNHIVRAALESICFQTRDILECMHQECGYEINKLHAD-----GKL 446
            | .:|....|.|:   ....|..:.||..|:...    :..|..|:.. :.:.:|..     |..
E. coli   371 W-YHAAPSFINLSIDPDKCNKATLFRALEENAAI----VSACNLQQIA-DFSNIHPSSLVFAGGG 429

  Fly   447 TTNNLLMQLQADTIGMPVFRSQLMDSTAFGAAMCAAQADGVNLCQFEPEKRY--YENVHYDTFLA 509
            :...|..|:.||..|:||....:.::||.|.|:.|....|:.....|..:|.  :|..|      
E. coli   430 SKGKLWSQILADVSGLPVNIPVVKEATALGCAIAAGVGAGIFSSMAETGERLVRWERTH------ 488

  Fly   510 TTTDVERKERY----GKWKRAVERSLGWV 534
             |.|.|:.|.|    .||:...:..||.|
E. coli   489 -TPDPEKHELYQDSRDKWQAVYQDQLGLV 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 126/546 (23%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 126/546 (23%)
lsrKNP_416028.3 PRK10939 10..530 CDD:182853 128/549 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001035
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
21.910

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