DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gk2 and RPT6

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_011467.1 Gene:RPT6 / 852834 SGDID:S000003016 Length:405 Species:Saccharomyces cerevisiae


Alignment Length:340 Identity:72/340 - (21%)
Similarity:122/340 - (35%) Gaps:90/340 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VPFRSKELRKQSLIQHTG---------------LVGVIDEGTKTIGFSIYTTPDFKEIAAHRVEL 63
            |.|...|||   |:|..|               ||.|..||.       |.....|:|....::.
Yeast    55 VRFIKDELR---LLQEPGSYVGEVIKIVSDKKVLVKVQPEGK-------YIVDVAKDINVKDLKA 109

  Fly    64 S--VITPQDGWY-------EQDPL--------------EMMASINKCAEEAIKQLPEQGFSASDI 105
            |  |....|.:.       :.|||              :|:..:.|..:| ||::.|......::
Yeast   110 SQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKE-IKEVIELPVKHPEL 173

  Fly   106 V-TVGITNQRETTIVWDAVTGKPLYNALLWKDIRTSTTVEQIVAKVQDPNHFRSSTGLPISTYF- 168
            . ::||...:...:.....|||              |.:.:.||...|....|.|....:..|. 
Yeast   174 FESLGIAQPKGVILYGPPGTGK--------------TLLARAVAHHTDCKFIRVSGAELVQKYIG 224

  Fly   169 -SALKIRWL----RDNVPEV-----RQAIRERRCK-AGTVDSWIVWNLTNGALHITDVTNASRTL 222
             .:..:|.|    |::.|.:     ..:|...|.: :|..||.:...:.. .|:..|....|:.:
Yeast   225 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLE-LLNQLDGFETSKNI 288

  Fly   223 LMNLET---QAWDPVLLKTFGIREEM---LPTIHSCSEIFGKITSERSPL-RGMTLSGIM----G 276
            .:.:.|   ...||.||:...|..::   .|::.:.:||. :|.|.:..| ||:.|..:.    |
Yeast   289 KIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEIL-RIHSRKMNLTRGINLRKVAEKMNG 352

  Fly   277 NQQASLLGQMCVKPG 291
            ...|.:.| :|.:.|
Yeast   353 CSGADVKG-VCTEAG 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 65/323 (20%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 65/323 (20%)
RPT6NP_011467.1 RPT1 12..403 CDD:224143 72/340 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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