DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gk2 and AT1G53780

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001185217.1 Gene:AT1G53780 / 841815 AraportID:AT1G53780 Length:620 Species:Arabidopsis thaliana


Alignment Length:126 Identity:35/126 - (27%)
Similarity:48/126 - (38%) Gaps:34/126 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 YTTPD---FKEIAAHRVELSVIT------PQDGWYEQDPLEMMASINKCAEEAIKQLPEQ----G 99
            |.|.|   |....|....||.||      ..:..:||:|..  |.|.| .|:.|.:|.|:    |
plant   189 YETGDIIEFDSTEASEEALSDITEFGSTEASEAHFEQEPYS--ARIKK-VEKEINELAEKICNLG 250

  Fly   100 FSASDIVTVGIT--NQRETTIVWDAVTGK-------PLYNALLWKDIRTSTTVEQIVAKVQ 151
            ...||   .|:.  ||      ||.|:.|       ||..|...:.|..:|...:.|..::
plant   251 IKESD---TGLAPPNQ------WDLVSDKQMMQEEQPLLVATCTQIISPNTEDAKYVVDIK 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 35/126 (28%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 35/126 (28%)
AT1G53780NP_001185217.1 cyclophilin <4..95 CDD:294131
RPT1 228..616 CDD:224143 23/87 (26%)
AAA 398..531 CDD:278434
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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