DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk2 and Shpk

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_083307.1 Gene:Shpk / 74637 MGIID:1921887 Length:476 Species:Mus musculus


Alignment Length:529 Identity:112/529 - (21%)
Similarity:195/529 - (36%) Gaps:132/529 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IDEGTKTI-------------GFSIYTTPDFKEIAAHRVELSVITPQDGWYEQDPLEMMASINKC 87
            ||.||.::             ||.:..:  ....|....|.:|..||.  .|||...::.::|:|
Mouse    10 IDLGTTSVKAALLEAAPSLPSGFVVLAS--CARAARAETESAVAGPQG--REQDVTRIIQALNEC 70

  Fly    88 AEEAIKQLPEQGFSASDIVTVGITNQRETTIVWDA------VTGKPLY--------NALLWKDIR 138
                :..||.|  ....:..:|::.|....:.|.|      :.|.|.:        :.:.|:|.|
Mouse    71 ----LDALPRQ--QLQRVRGIGVSGQMHGILFWKAGQGCEWMEGGPAFVFEPRAVSHLVTWQDGR 129

  Fly   139 TSTTVEQIVAKVQDP-NHFRSSTGLPISTYFSALKIRWLRDNVPEVRQAIRERRCKAGTVDSWIV 202
            .:::   .:|.:..| :|...:||...:|.|      ||..|.||..::..    .|||:..::|
Mouse   130 CNSS---FLASLPKPDSHLSVATGFGCATIF------WLLKNSPEFLKSYD----AAGTIQDYVV 181

  Fly   203 WNLTNGALHITDVTNASRTLLMNLETQAWDPVLLKTFGIREEMLPTIHSCSEIFGKITSERSPLR 267
            ..|......:....||:.....|.::|:|:...|:..|....:||.|.....:.|:.:.....:.
Mouse   182 AMLCGLPRPLMSDQNAASWGYFNTQSQSWNLDTLEKAGFPIHLLPDIAEPGSMAGRTSHTWFEIP 246

  Fly   268 GMTLSGI-MGNQQASL---LGQ-------------------MCVKPGQTKNTYRSGCFLLCNTGD 309
            ..|..|| :|:.|||:   :||                   :..:|.||.:......|.      
Mouse   247 KGTQVGIALGDLQASVYSCMGQRTDAVLNISTSVQLAASMPVGFQPLQTPDPAAPVAFF------ 305

  Fly   310 KPVFSRHGLLTTVAYKLGPQAPTIYAIEGAVSVAGHAL-SWLQNKVRILPDSRDAEKYAEMVPTS 373
             |.|.|..|....:...|....|..          |.| .|:.:   :..:..::..|:.|:..:
Mouse   306 -PYFDRTYLGVAASLNGGNVLATFV----------HMLVQWMAD---LGLEVEESTVYSRMIQAA 356

  Fly   374 GD-----VYFVPAFTG------LYAPYWRQNARGIIIGLTQFTRKNHIVRAALESICFQTRDILE 427
            ..     :...|...|      ..|...|.::..:.:|        |:.||    :|   |.|::
Mouse   357 AQQKDTHLTITPTVLGERHLPDQLASVTRISSSDLSLG--------HVTRA----LC---RGIVQ 406

  Fly   428 CMHQECGYE------INKLHADGK-LTTNNLLMQLQADTIGMPVFRSQLMDSTAFGAAMCAAQAD 485
            .:|....::      :.::...|. |:.|.:|.|........||...|.:|: |||||:...|.|
Mouse   407 NLHSMLPFQQLKEWGVARVVGSGSALSRNEVLKQEVQRAFPFPVCFGQDVDA-AFGAALVMLQRD 470

  Fly   486 GVNLCQFEP 494
               |.|.||
Mouse   471 ---LSQKEP 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 112/529 (21%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 112/529 (21%)
ShpkNP_083307.1 FGGY_SHK_like 5..466 CDD:212661 106/514 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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