DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk2 and CG3534

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_650582.1 Gene:CG3534 / 42047 FlyBaseID:FBgn0038463 Length:552 Species:Drosophila melanogaster


Alignment Length:486 Identity:87/486 - (17%)
Similarity:163/486 - (33%) Gaps:131/486 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 KCAEEAIKQLPEQGFSASDIVTVGITNQRETTIVWDAVTGKPLYN-------------------- 130
            |..:..:.:|..|....|.:..:..:.|:..::.|.......|.|                    
  Fly    71 KAMDIVLDRLVMQQADLSTVAAISGSGQQHGSLYWSKHGINTLQNLDSEKFLHAQIDDSAFVVNR 135

  Fly   131 ALLWKDIRTSTTVEQIVAKVQDPNHFRSSTGLPISTYFSALKIRWLRDNVPEVRQAIRERRCKA- 194
            ..:|.|..|:....::...|....:....||......|:.          |::|: |.::||.| 
  Fly   136 TPIWMDATTTKQCLEMEMAVGGKLNMVELTGSKCYERFTG----------PQIRK-IYQQRCHAY 189

  Fly   195 ------GTVDSWIVWNLTNGALHITDVTNASRTLLMNLETQAWDPVLLKTFGIREEMLPTIHSCS 253
                  ..|.|:|. :|..|::...|.::.|...|:::..:.|....|..             |:
  Fly   190 EEANRISLVSSFIS-SLFLGSVAPIDFSDGSGMNLLDIRKKNWSKECLNV-------------CA 240

  Fly   254 -EIFGKITSERSPLRGMTLSGIMGNQQASLLGQMCVKPGQTKNTYRSGCFLLCNTGDKPVFSRHG 317
             ::..::....||      :.|:||.....:.:....|         .|.:..:|||.| .:..|
  Fly   241 PDLDKRLDIPVSP------NSILGNVSPYFVERFSFSP---------DCKVAASTGDNP-SALSG 289

  Fly   318 LL---TTVAYKLGPQAPTIYAIEGAVS-VAGHAL------------------------------- 347
            :|   :.:...:|.....:.:::..:: ..||.|                               
  Fly   290 MLVGSSWLTISMGTSDTLMMSLKEPLNWEEGHILCHPTETEEFMGLLCFRNASLVREEMNKKTTG 354

  Fly   348 -SWLQNKVRILPDSRDAEKYAEMVPTSGDVYFVPAFTGLYAPYWRQN--------ARGIIIGLTQ 403
             .|  :|.....||.....:..|.....|:..:|...|:..  |.:.        |||:|    :
  Fly   355 GDW--DKFNEYLDSTPRGNFGNMAVHFNDMEIIPKAQGILR--WNREMDPSSPDAARGVI----K 411

  Fly   404 FTRKNHIVRAALESICFQTRDILECMHQECGYEINKLHADGKLTTNNLLMQLQADTIGMPV-FRS 467
            |:.....:||.:|......|.:.|.:..:.|.| .::...|..:.|..::|..||....|| .:.
  Fly   412 FSSPQIEIRALVEGQMLHHRAVAEDLGYKFGPE-TQILVTGGASVNKSILQTIADVFNAPVHIQD 475

  Fly   468 QLMDSTAFGAAMCAAQA-------DGVN-LC 490
            :..::...|||..:|.|       |||. ||
  Fly   476 EGFEAALLGAAYRSAYALYLQEAGDGVTPLC 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 87/486 (18%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 87/486 (18%)
CG3534NP_650582.1 FGGY_D-XK_euk 10..491 CDD:212660 80/469 (17%)
PLN02669 11..546 CDD:178274 87/486 (18%)
NBD_sugar-kinase_HSP70_actin <447..545 CDD:302596 17/60 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443074
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10196
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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