DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gk2 and psmc1b

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001002091.1 Gene:psmc1b / 415181 ZFINID:ZDB-GENE-040625-69 Length:440 Species:Danio rerio


Alignment Length:201 Identity:43/201 - (21%)
Similarity:72/201 - (35%) Gaps:49/201 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 ASRTLLMNLETQA----------WDPVLLKTFGIR--EEMLPTIHSCSEIFGKITSER-SPLRGM 269
            ||:..|:...||.          .|.:|::...||  |:|.|......|...|:...| :|:...
Zfish    46 ASKLPLVTPHTQCRLKLLKQDRIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVG 110

  Fly   270 TLSGIMGNQQA------------SLLGQMCVKPGQTKNTYRSGCFLLCNTGDKPVFSRHGLLTTV 322
            ||..|:.:..|            |:|..:      .|:....||.:|.|         |.:...:
Zfish   111 TLEEIIDDNHAIVSTSVGSEHYVSILSFV------DKDLLEPGCSVLLN---------HKVHAVI 160

  Fly   323 AYKLGPQAP--TIYAIEGAVSVAGHALSWLQNKVRILPDSRD-----AEKYAEM--VPTSGDVYF 378
            ...:....|  |:..:|.|.......:..|.|:::.:.:|.:     .|.|.||  .|..|.:.:
Zfish   161 GVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILY 225

  Fly   379 VPAFTG 384
            ....||
Zfish   226 GAPGTG 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 43/201 (21%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 43/201 (21%)
psmc1bNP_001002091.1 PTZ00361 1..440 CDD:185575 43/201 (21%)
Prot_ATP_ID_OB 108..>176 CDD:293059 14/82 (17%)
AAA 222..355 CDD:278434 2/10 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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