DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk2 and kat-60L1

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001163523.1 Gene:kat-60L1 / 40715 FlyBaseID:FBgn0037375 Length:673 Species:Drosophila melanogaster


Alignment Length:534 Identity:97/534 - (18%)
Similarity:175/534 - (32%) Gaps:104/534 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PFRSKELRKQSLIQHTGL---------VGVIDEGTKTIGFSIYTTPDFKEIAAHRVELSVITPQ- 69
            |.|:..|:|.|...|:..         :|....|...||.|:....  |:....:|..:.:.|| 
  Fly   142 PSRNASLKKSSEGGHSSTAERHRPVNNLGSNAPGGLGIGGSVPLRS--KQRLPTQVSAAEVAPQP 204

  Fly    70 ----------------DGWY----EQDPLEM---MASINKCAEEAIKQLPEQGFSASDIVTVGIT 111
                            :.|.    .:|| |:   :.|||..|..:.......| ||.::...|..
  Fly   205 RASQTAQMPFPSQQQDNRWVSSLRRRDP-ELQPTLPSINSNANSSSLSQSHHG-SAGNVGLAGAG 267

  Fly   112 NQRETTIVWDAVTGKPLYNALLWKDIRTSTTVEQIVAKVQDPNHFRSSTGLPISTYFSALKIRWL 176
            .......:.....|:|...:.:...:|.|.:||::.|:       :.||...::.....:|...|
  Fly   268 APTPAASMGTMRLGRPARASAMTAALRKSRSVERLRAR-------KLSTNTQLNLKHKPVKKNSL 325

  Fly   177 RDN-----------------VPEVRQAIRERRCKAGTVDSWIVWNLTNGALHITDVTNASRTLLM 224
            .:|                 ...:..:....:|...|....  ::.....:|:.|  ...:.:|.
  Fly   326 DENSNSDDQDATTSLEDNSHAQSLATSHNTPKCSPKTKAKH--FSPLGYEVHLVD--TLEKDILQ 386

  Fly   225 NLETQAWDPVL----LKTFGIREEMLPTIHSCSEIFGKITSERSPLRGMTLSGIMGNQQASLLGQ 285
            ......|..|.    .||......:||.|  ..|.|..|   |.|.||:.:.|..|..:..|...
  Fly   387 RHPCIKWTDVAGLNEAKTILQEAVVLPVI--MPEFFKGI---RRPWRGVLMVGPPGTGKTMLAKA 446

  Fly   286 MCVKPGQTKNTYRSGCFLLCNTGDKPVFSRHGLLTTVAYKLGPQAPTIYAIEGAVSVAG-----H 345
            :..:.|.|.....|........|:.....|  ||..:|....|....|..|:...:..|     .
  Fly   447 VATECGTTFFNVSSSTLTSKYRGESEKLVR--LLFEMARFYAPSTIFIDEIDALCASRGSDSEHE 509

  Fly   346 ALSWLQNKVRILPDSRDAEKYAEMVPTSGDVYFVPAFTG----LYAPYWRQNARGIIIGLTQFTR 406
            |....:.::.|..|..:|....|      .|..|.|.|.    :...:.|:..:.|.|.|.....
  Fly   510 ASRRFKAELLIQMDGLNASMQEE------KVIMVLAATNHPWDIDEAFRRRFEKRIYIPLPNEGT 568

  Fly   407 KNHIVRAALESIC----FQTRDILECMHQECGYEINKLHADGKL---------TTNNLLMQLQAD 458
            ::.:::..|:.:|    ..|..|.:.:....|.:|:.:..|..:         .|.:.:.|::.:
  Fly   569 RSALLKLCLKDVCLSPSLNTGIIGDELQGYSGSDISNVCRDASMMAMRRLISGRTPDQIKQIRRE 633

  Fly   459 TIGMPVFRSQLMDS 472
            .:..|:......|:
  Fly   634 EVDQPITLQDFQDA 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 91/518 (18%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 91/518 (18%)
kat-60L1NP_001163523.1 AAA 426..565 CDD:214640 31/146 (21%)
AAA 430..563 CDD:278434 27/140 (19%)
Vps4_C <638..671 CDD:286426 2/10 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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