DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk2 and fggy

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_998446.2 Gene:fggy / 406567 ZFINID:ZDB-GENE-040426-2461 Length:545 Species:Danio rerio


Alignment Length:548 Identity:116/548 - (21%)
Similarity:206/548 - (37%) Gaps:139/548 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VGVIDEGTKTIGFSIYTTPDFKEIAAHRVELSVITPQDGWYEQDPLEMMASINKCAEEAIKQLPE 97
            ||| |.|:.::..:: .:||.:........::|..|....|||...|:.   :||. :.:|::.|
Zfish     7 VGV-DVGSASVRAAL-VSPDGQLRRTAEEPIAVHEPCVDHYEQSSTEIW---SKCC-QTVKRVTE 65

  Fly    98 QGFSASDIVTVGITNQRETTIVWDAVTGKPL---------YNALLWKDIRTSTTVEQIVA----- 148
             |..|:.:..:|........::....  :||         .|.::|.|.|.:....:|.|     
Zfish    66 -GVDAACVRGIGFDGTCSLVVLDQQF--RPLAVNLAGVCDRNVVMWMDHRAAAQASRITACRHTL 127

  Fly   149 ----------KVQDPNHFRSSTGLPISTYFSALKIRWLRDNVPEVRQAIRERRCKAGTVDSWIVW 203
                      ::|.|                  |:.||::|:|:   :...|......:..::.|
Zfish   128 LQRVGGVMSPEIQPP------------------KLLWLKENLPD---SCWTRAAHFFDLPDFLSW 171

  Fly   204 NLTNGALHITDVTNASRTLLMNL------ETQAWDPVLLKTFGIREEMLPTIHSCSEIFGKITSE 262
            ..| |:|        ||:|...:      .::.||.......|: |:::      .:.:.:|.|:
Zfish   172 KAT-GSL--------SRSLCTLVCKWTYSASEGWDDTFWSAIGL-EDLI------EDSYARIGSQ 220

  Fly   263 -----RSPLRGMTLSGI--MGNQQASLLGQMCVKP--------GQTKNTYRSGC---------FL 303
                 .:..||:|.:..  :|..:.:.:|...:..        |...:.....|         .|
Zfish   221 VCCPGAAVGRGLTAAAAADLGLNEGTAVGASLIDAHAGGIGVLGADVSGLHLPCEHQPLTARMAL 285

  Fly   304 LCNTGD-KPVFSRHGLLTTVAYKLGP----QAPTIYAIEGAVS---------VAGHAL------- 347
            :|.|.. ....||..||....:  ||    ..|.::..||..|         |.|||.       
Zfish   286 ICGTSSCHMAVSREPLLVPGVW--GPYLSAMLPGLWLNEGGQSATGKLLDHVVKGHAAFRQLEEQ 348

  Fly   348 -------SWLQNKVRILPDSRDAEKYAEMVPTSGDVYFVPAFTGLYAPYWRQNARGIIIGLTQFT 405
                   .:.|..:.:...|.|| .:.|.:.|  .::..|.|.|..:|...|.|||.::||:...
Zfish   349 AEHSGRHIYTQLNLHLQQMSTDA-THLEQLTT--HLHIWPDFHGNRSPLADQTARGTVVGLSLSQ 410

  Fly   406 RKNHIV---RAALESICFQTRDILECMHQECGYEINKLHADGKLTTNNLLMQLQADTIGMPVFRS 467
            ..:.:.   .|.|:::...:|.|:..| .|.|::|..|...|.|:.|.|.:|..|:|.|:||...
Zfish   411 TLDDLALLYLATLQALALGSRHIIAAM-TEAGHDITTLFLCGGLSKNTLFVQTHANTTGLPVVLP 474

  Fly   468 QLMDSTAFGAAMCAAQADGVNLCQFEPE 495
            ...::...|||:..|.|.  :.|...||
Zfish   475 AEREAVLLGAAVIGACAS--SDCTSIPE 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 116/548 (21%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 116/548 (21%)
fggyNP_998446.2 FGGY_YpCarbK_like 4..539 CDD:212663 116/548 (21%)
5C_CHO_kinase 5..538 CDD:273552 116/548 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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