DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk2 and Gk5

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_008764796.1 Gene:Gk5 / 367146 RGDID:1311223 Length:534 Species:Rattus norvegicus


Alignment Length:531 Identity:157/531 - (29%)
Similarity:255/531 - (48%) Gaps:56/531 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IDEGTKTIGFSIY-TTPDFKEIAAHRVELSVITPQDGWYEQDPLEMMASINKCAEEAIKQLPEQG 99
            :|.|:..|...:| .|...:..:|.:||  .:.||.||.|.||..:.|......::|:|   ..|
  Rat    29 LDVGSTVIRCHVYDRTARVRGSSAQKVE--NVYPQPGWVEIDPDALWAQFVAVIKDAVK---AAG 88

  Fly   100 FSASDIVTVGITNQRETTIVWDAVTGKPLYNALLWKDIRTSTTVE----QIVAKVQDPN----HF 156
            ...:.||.:||:.||.|.|.|:..||...:|.:.|:|:|.:..|:    .::.|:....    ||
  Rat    89 VQMNQIVGLGISTQRATFITWNKKTGHHFHNFISWQDLRAAELVKSWNNSLIMKLLHGATKLLHF 153

  Fly   157 --RSSTGLPIS-----TYFSALKIRWLRDNVPEVRQAIRERRCKAGTVDSWIVWNLTNGALHITD 214
              |:...|.:|     |....|::.|:..|:|||::|:.|..|..||:|:|:::.||.|:.:.||
  Rat   154 FSRNKVMLTVSRFTFTTQHVTLRLVWILQNLPEVKKAVEEDNCCFGTIDTWLLYKLTKGSSYATD 218

  Fly   215 VTNASRTLLMNLETQAWDPVLLKTFGIREEMLPTIHSCSEIFGKITSERSPLRGMTLS--GIMGN 277
            .:|||.|...:.....|..::.....|...:||.:...|..||.:..|   :.|:.:.  .::|:
  Rat   219 YSNASTTGFFDPYAMRWSKLIATMVSIPFSILPPVRDTSYNFGSVDEE---IFGVPIPVVALVGD 280

  Fly   278 QQASLLGQMCVKPGQTKNTYRSGCFLLCNTGDKPVFSRHGLLTTVAYKLGPQAPTIYAIEGAVSV 342
            ||:::.|:.|.:.|..|.|..:|.||..|||..|.....|....:.:|:|.:  .:...||....
  Rat   281 QQSAMFGECCFETGDVKLTMGTGTFLDINTGKTPQHVNGGFYPLIGWKIGHE--LVCLAEGNAGD 343

  Fly   343 AGHALSWLQNKVRILPDSRDAEKYAEMVPTSGDVYFVPAFTGLYAPYWRQNARGIIIGLTQFTRK 407
            .|.|:.|.| |:.:..|:.:.||.|..:..|..|||||:|:||.||.....|....:||...|.|
  Rat   344 TGTAIVWAQ-KLDLFTDAAETEKMALSLEDSEGVYFVPSFSGLQAPLNDPCACASFMGLKHSTSK 407

  Fly   408 NHIVRAALESICFQTRDILECMHQECGYEINKLHADGKLTTNNLLMQLQADTIGMPVFRSQLMDS 472
            .|:|||.||||.|:.:.:.:.:.:|....:..:.|||.:..|..:||:.:|.|...:.|....|.
  Rat   408 YHLVRAILESIAFRNKQLYDMLQREIQIPVTNIRADGGVCNNAFVMQMTSDLINEKIDRPAHFDM 472

  Fly   473 TAFGAAMCAAQADGV--------NLCQ----FEPEKRYYENVHYDTFLATTTDVERKERYGKWKR 525
            :..|||..|..|.|.        .|.|    |:|::::.|   |:..:.            .|.:
  Rat   473 SCLGAASLAGLAVGFWADKEELQKLRQSEMVFKPQRKWQE---YEVNME------------NWVK 522

  Fly   526 AVERSLGWVIK 536
            ||:||:.|..|
  Rat   523 AVKRSMNWYNK 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 155/526 (29%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 155/526 (29%)
Gk5XP_008764796.1 GlpK 23..530 CDD:223628 155/526 (29%)
FGGY_GK5_metazoa 25..527 CDD:212665 153/523 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352321at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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