DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk2 and Fggy

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_038965462.1 Gene:Fggy / 298250 RGDID:1359429 Length:558 Species:Rattus norvegicus


Alignment Length:497 Identity:114/497 - (22%)
Similarity:185/497 - (37%) Gaps:122/497 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 PQDGWYEQDPLEMMASINKCAEEAIKQLPEQGFSASDIVTVGITNQRETTIVWDAV--------T 124
            ||...:||...::.|:..:..:|.:     ||..|..|..:|. :...:.:|.|..        .
  Rat    77 PQFNHHEQSSEDIWAACCRVTKEIV-----QGIDAHRIRGLGF-DATCSLVVLDKEFHPLPVNRE 135

  Fly   125 GKPLYNALLWKDIRTSTTVEQIVAKVQDPNHFRSS----TGLPISTYFSALKIRWLRDNVPEVRQ 185
            |....|.::|.|.|..:.|.:|       |..:.|    .|..:|....|.|:.||::|:.|:  
  Rat   136 GDSSRNIIMWLDHRAVSQVHRI-------NETKHSVLQYVGGVMSVEMQAPKLLWLKENLREI-- 191

  Fly   186 AIRERRC--KAG---TVDSWIVWNLTNGALHITDVTNASRTLLMNLET----QAWDPVLLKTFGI 241
                  |  |||   .:..::.|..|.       ||..|...|:...|    :.||....|..|:
  Rat   192 ------CWDKAGHFFDLPDFLSWKATG-------VTARSLCSLVCKWTYSAEKGWDDSFWKMIGL 243

  Fly   242 REEML-------------PTIHSCSEIFGKITSERSPLRGMTLS-----------GIMGNQQASL 282
             |:::             |.....|.:..:...|.....|:.::           |::|   |.:
  Rat   244 -EDLIGDNYNKIGNLVLPPGASLGSGLIPEAARELGLPSGIAVAASLIDAHAGGLGVIG---ADV 304

  Fly   283 LGQMCVKPGQTKNTYRSGCFLLCNTGD-------KPVFSRHGLLTTVAYKLGP----QAPTIYAI 336
            .|......||   ...|...::|.|..       .|:|        |....||    ..|..:..
  Rat   305 RGHGLTCEGQ---PVTSRLAVICGTSSCHMGISKDPIF--------VPGVWGPYFSAMVPGFWLN 358

  Fly   337 EGAVSVAGHALSWLQNKVRILPDSR------------------DAEKYAEMVP-TSGDVYFVPAF 382
            ||..||.|..:..:.......|:.:                  |..|.|:.|. .:.|::..|.|
  Rat   359 EGGQSVTGKLIDHMVQSHPAFPELQAKATARCQSIYAYLNSHLDLIKKAQPVGFLTVDLHVWPDF 423

  Fly   383 TGLYAPYWRQNARGIIIGLTQFTRKNHIV---RAALESICFQTRDILECMHQECGYEINKLHADG 444
            .|..:|......:|::.|||.....:.:.   .|.:::|.|.||.|:|.| :..|:.::.|...|
  Rat   424 HGNRSPLADLTLKGMVTGLTLSRDLDDLAVLYLATIQAIAFGTRFIIETM-EAAGHSLSTLFLCG 487

  Fly   445 KLTTNNLLMQLQADTIGMPVFRSQLMDSTAFGAAMCAAQADG 486
            .|:.|.|.:|:.||..||||..||.::|...|||:..|.|.|
  Rat   488 GLSKNPLFVQMHADITGMPVVLSQEVESVLVGAAILGACASG 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 114/497 (23%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 114/497 (23%)
FggyXP_038965462.1 FGGY_YpCarbK_like 41..536 CDD:212663 114/497 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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