DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gk2 and Psmc2

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_150239.2 Gene:Psmc2 / 25581 RGDID:3428 Length:433 Species:Rattus norvegicus


Alignment Length:97 Identity:24/97 - (24%)
Similarity:40/97 - (41%) Gaps:23/97 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 GALHITDVTNASRTLLMNLETQAWDPVLLKTFGIREEM---LPTIHSCSEIFGKITSERSPLRGM 269
            |.:.:...||...||         ||.|::...:..::   ||.:...:.|| ||.:     |.|
  Rat   313 GNIKVLMATNRPDTL---------DPALMRPGRLDRKIEFSLPDLEGRTHIF-KIHA-----RSM 362

  Fly   270 TLSGIMGNQQASLLGQMCVKPGQTKNTYRSGC 301
            :   :..:.:..||.::|  |..|....||.|
  Rat   363 S---VERDIRFELLARLC--PNSTGAEIRSVC 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 24/97 (25%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 24/97 (25%)
Psmc2NP_150239.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
RPT1 23..430 CDD:224143 24/97 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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