DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gk2 and rpt6

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_595870.1 Gene:rpt6 / 2540487 PomBaseID:SPBC23G7.12c Length:403 Species:Schizosaccharomyces pombe


Alignment Length:365 Identity:77/365 - (21%)
Similarity:130/365 - (35%) Gaps:95/365 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RSKELRKQ-SLIQHTGLVGVIDEGTKTIG-------------FSIYTTP--DFKEIAAH-RV--- 61
            |.:.||:: .|:|..|  ..:.|..||:|             :.:..:|  |.|||..: ||   
pombe    51 RVRLLREEIQLLQEPG--SYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALR 113

  Fly    62 ----ELSVITPQDGWYEQDPL--------------EMMASINKCAEEAIKQLPEQGFSASDIV-T 107
                :|..|.|.    :.|||              ||:..:.|..:| ||::.|......::. :
pombe   114 NDSYQLIKILPN----KVDPLVSLMMVEKIPDSTYEMVGGLEKQIKE-IKEVIELPVKHPELFES 173

  Fly   108 VGITNQRETTIVWDAVTGKPLYNALLWKDIRTSTTVEQIVAKVQDPNHFRSSTGLPISTYF--SA 170
            :||...:...:.....|||              |.:.:.||...|....|.|....:..|.  .:
pombe   174 LGIPQPKGILLYGPPGTGK--------------TLLARAVAHHTDCKFIRVSGSELVQKYIGEGS 224

  Fly   171 LKIRWL----RDNVPEV-----RQAIRERR--CKAGTVDSWI---VWNLTNGALHITDVTNASRT 221
            ..:|.|    |::.|.:     ..:|...|  ...|:.||.:   :..|.| .|...:.|...:.
pombe   225 RMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLN-QLDGFEATKNIKV 288

  Fly   222 LLMNLETQAWDPVLLKTFGIREEM---LPTIHSCSEIFGKITSERSPLRGMTLSGIM----GNQQ 279
            ::........||.||:...|..::   .|:..:.:||....:...:..||:.|..|.    |...
pombe   289 IMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASG 353

  Fly   280 ASLLGQMCVKPGQ----------TKNTYRSGCFLLCNTGD 309
            |.|.| :|.:.|.          |:..:......:.|.||
pombe   354 AELKG-VCTEAGMFALRERRVHVTQEDFELAVAKVLNKGD 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 72/350 (21%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 72/350 (21%)
rpt6NP_595870.1 RPT1 3..401 CDD:224143 77/365 (21%)
AAA_16 149..>202 CDD:289934 13/67 (19%)
AAA 182..315 CDD:278434 28/147 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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