DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gk2 and Katna1

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_035965.2 Gene:Katna1 / 23924 MGIID:1344353 Length:493 Species:Mus musculus


Alignment Length:105 Identity:23/105 - (21%)
Similarity:43/105 - (40%) Gaps:20/105 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SKELRKQSLIQHTGLVGVI--DEGTKTIGFSIYTT-P-DFKEIAAHRVELSVITPQDGWYEQD-- 76
            |:.::.:.|:|..|:.|..  |:.:|.:.....|. | |..|....|:|..:..|......::  
Mouse   328 SRRMKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREEL 392

  Fly    77 ------PLEMMASINKCAEEAIKQLPE--QGFSASDIVTV 108
                  .||:...:|      :..:.|  :|:|.:||..|
Mouse   393 LRISLRELELADDVN------LASIAENMEGYSGADITNV 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 20/92 (22%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 20/92 (22%)
Katna1NP_035965.2 AAA 243..384 CDD:214640 14/55 (25%)
AAA 247..383 CDD:278434 13/54 (24%)
Vps4_C <458..491 CDD:286426
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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