DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk2 and shpk-1

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001366916.1 Gene:shpk-1 / 188886 WormBaseID:WBGene00012017 Length:430 Species:Caenorhabditis elegans


Alignment Length:422 Identity:82/422 - (19%)
Similarity:130/422 - (30%) Gaps:174/422 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 IGFSIYTTPDFKEIAAHRVELSVITPQDGWYE---------QDPLEMMASINKCAEEAIKQLPEQ 98
            :|..|.||.  .:|.|...| :||......||         |:|..::.::....|.....|..:
 Worm     7 VGIDIGTTS--AKICARNGE-NVILEFKKIYEGDNSDAAGLQNPKIIIQTVLDLLERTKSNLESR 68

  Fly    99 GFSASDIVTVG------ITNQRETTIVWDAVTGKPLYNALLWKDIRTSTTVEQIVAKVQDPNHFR 157
            ....|:|.|.|      :..||:..|..:.:|..||||   |.                     .
 Worm    69 NLKISNIWTCGQMHGIVMWKQRQNEIDLETLTISPLYN---WT---------------------Y 109

  Fly   158 SSTGLP-------------ISTYFSALKIRWLRDNVPEVRQAIRERRCKAGTVDSWIVWNLTNGA 209
            |||.||             :...|..:.:.:|..:.||.                     ||| .
 Worm   110 SSTELPAFLKTIPKWECGDLHPGFGLVTLAFLNYSNPEF---------------------LTN-F 152

  Fly   210 LHITDVTNASRTLLMNLETQAWDPVL----LKTFGIREE----------------MLPTIHSCSE 254
            :|...:.:    |.:::.||..||::    ..::|...|                .||.|:|.||
 Worm   153 IHCGTIMD----LFISILTQNPDPLISHHNAHSWGYCTENATWQSEILDFLPKTLKLPDINSSSE 213

  Fly   255 IFGKITSERSPLRGMTLSGIMGNQQAS-------------LLG---QMCV--------------- 288
            :.|       ...|.......|:.|||             :||   |:|.               
 Worm   214 VSG-------TWHGAKCHVASGDLQASVASLDYYENTAYVILGTSAQLCCLIQTSEKNATVIPAT 271

  Fly   289 ---KPGQTKNTYRSGCFLLCNTGDKPVFSRHGLLTTVAYKLGPQAPTIYAIEGAVSVAGHALSWL 350
               .|..|..|..:.|.:  |.|:           .:...|...:|.:|        :.:.|..|
 Worm   272 VVRLPFSTSKTLVAACAM--NGGN-----------ALEATLKMNSPEVY--------SSNRLQEL 315

  Fly   351 QNKVRILPDSRDAEKYAEMVPTS--GDVYFVP 380
            .|::         :|.|..:|.:  .|..|:|
 Worm   316 LNQL---------DKSAPAMPPNLRIDPIFIP 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 82/422 (19%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 82/422 (19%)
shpk-1NP_001366916.1 FGGY_SHK_like 4..430 CDD:212661 82/422 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.