DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gk2 and R11F4.1

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_494721.1 Gene:R11F4.1 / 173747 WormBaseID:WBGene00020007 Length:502 Species:Caenorhabditis elegans


Alignment Length:506 Identity:199/506 - (39%)
Similarity:319/506 - (63%) Gaps:12/506 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LVGVIDEGTKTIGFSIYTTPDFKEIAAHRVELSVITPQDGWYEQDPLEMMASINKCAEEAIKQLP 96
            |:..||:||.:..|.::.....:.:.:|::|:..:.|..||.|.||:|:..::..|..:.|::|.
 Worm     3 LLAAIDQGTSSSRFLVFEADTGELVTSHQIEVRQLFPHGGWVEMDPMELYDTVVSCISKTIEKLE 67

  Fly    97 EQGFSASDIVTVGITNQRETTIVWDAVTGKPLYNALLWKDIRTSTTVEQIVAKV--QDPNHFRSS 159
            ..|.||.:|.:||:.|||||:||||..||||||||::|.|.|||:..::.:::.  :..:.||:.
 Worm    68 NLGISADEIKSVGVANQRETSIVWDKETGKPLYNAIVWLDTRTSSLADEAISRTASKSKDEFRAK 132

  Fly   160 TGLPISTYFSALKIRWLRDNVPEVRQAIRERRCKAGTVDSWIVWNLTNGALHITDVTNASRTLLM 224
            |||||..||||||::||..|||||::|..:.....||||:|::|.|| || ::|||:|||||||:
 Worm   133 TGLPIHPYFSALKLKWLFQNVPEVKKAYADGNLMFGTVDTWLIWKLT-GA-YVTDVSNASRTLLL 195

  Fly   225 NLETQAWDPVLLKTFGIREEMLPTIHSCSEIFGKITSERSPLRGMTLSGIMGNQQASLLGQMCVK 289
            :|..:.|...|.:.|.:..|:||.|.|.:|::|..  ::.||.|:.|||.:|:|||:::|..|:.
 Worm   196 DLHKRKWSTQLCEFFDLPIEILPEIRSSAEVYGHF--DKGPLEGVPLSGCLGDQQAAMVGHQCLN 258

  Fly   290 PGQTKNTYRSGCFLLCNTGDKPVFSRHGLLTTVAYKLGPQAPTIYAIEGAVSVAGHALSWLQNKV 354
            .|||||||.:|.|:|||.|.:|:.|::||||||.::.|..:|.:||:||:.|:.|:.:.:|::..
 Worm   259 AGQTKNTYGTGTFMLCNIGTRPIISKNGLLTTVGFQFGADSPVVYALEGSGSIGGNVVRFLRDNF 323

  Fly   355 RILPDSRDAEKYAEMVPTSGDVYFVPAFTGLYAPYWRQNARGIIIGLTQFTRKNHIVRAALESIC 419
            :.:.|:::.|.....|..:...||||:|||||.|||...|||.|:||||.|::.||..|||.::.
 Worm   324 KFISDAKEMEGLCRSVEDTSGAYFVPSFTGLYTPYWDSTARGTILGLTQVTQREHICLAALRAVA 388

  Fly   420 FQTRDILECMHQ--ECGYEINKLHADGKLTTNNLLMQLQADTIGMPVFRSQLMDSTAFGAAMCAA 482
            ||:.:::..:.|  |.|.::..|..||.:..|.|..::|||.:|..:...::.:.:.:|||:   
 Worm   389 FQSAEMIAAVEQDLEGGTKVTTLKVDGGMIANKLFNEIQADIMGRDIVTPKITEISGWGAAV--- 450

  Fly   483 QADGVNLCQFEPEKRYYENVHYDTFLATTTDVERKERYGKWKRAVERSLGW 533
             |.|:...|...::...::...:.:.....|..|.....:||.||:||.||
 Worm   451 -AGGIGAQQISLDEFLQQSSEDNRYTPQKDDNWRSAELARWKEAVKRSCGW 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 197/504 (39%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 197/504 (39%)
R11F4.1NP_494721.1 glycerol_kin 3..500 CDD:273549 197/504 (39%)
FGGY_GK 3..491 CDD:198347 191/495 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157593
Domainoid 1 1.000 163 1.000 Domainoid score I2404
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21848
Inparanoid 1 1.050 429 1.000 Inparanoid score I967
Isobase 1 0.950 - 0 Normalized mean entropy S1003
OMA 1 1.010 - - QHG60628
OrthoDB 1 1.010 - - D352321at33208
OrthoFinder 1 1.000 - - FOG0001035
OrthoInspector 1 1.000 - - otm14516
orthoMCL 1 0.900 - - OOG6_100613
Panther 1 1.100 - - O PTHR10196
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1107
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.760

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