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Protein Alignment Gk2 and Psmc1
DIOPT Version :9
Sequence 1: | NP_001286904.1 |
Gene: | Gk2 / 38221 |
FlyBaseID: | FBgn0035266 |
Length: | 576 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_476464.1 |
Gene: | Psmc1 / 117263 |
RGDID: | 621097 |
Length: | 440 |
Species: | Rattus norvegicus |
Alignment Length: | 189 |
Identity: | 43/189 - (22%) |
Similarity: | 72/189 - (38%) |
Gaps: | 40/189 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 220 RTLLMNLETQAWDPVLLKTFGIR--EEMLPTIHSCSEIFGKITSER-SPLRGMTLSGIMGNQQA- 280
|..|:.|| :..|.:|::...|| |:|.|......|...|:...| :|:...||..|:.:..|
Rat 59 RLKLLKLE-RIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAI 122
Fly 281 -----------SLLGQMCVKPGQTKNTYRSGCFLLCNTGDKPVFSRHGLLTTVAYKLGPQAP--T 332
|:|..: .|:....||.:|.| |.:...:...:....| |
Rat 123 VSTSVGSEHYVSILSFV------DKDLLEPGCSVLLN---------HKVHAVIGVLMDDTDPLVT 172
Fly 333 IYAIEGAVSVAGHALSWLQNKVRILPDSRD-----AEKYAEM--VPTSGDVYFVPAFTG 384
:..:|.|.......:..|.|:::.:.:|.: .|.|.|| .|..|.:.:.|..||
Rat 173 VMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTG 231
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG0554 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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