DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gk2 and Psmc1

DIOPT Version :10

Sequence 1:NP_647655.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_476464.1 Gene:Psmc1 / 117263 RGDID:621097 Length:440 Species:Rattus norvegicus


Alignment Length:189 Identity:43/189 - (22%)
Similarity:72/189 - (38%) Gaps:40/189 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 RTLLMNLETQAWDPVLLKTFGIR--EEMLPTIHSCSEIFGKITSER-SPLRGMTLSGIMGNQQA- 280
            |..|:.|| :..|.:|::...||  |:|.|......|...|:...| :|:...||..|:.:..| 
  Rat    59 RLKLLKLE-RIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAI 122

  Fly   281 -----------SLLGQMCVKPGQTKNTYRSGCFLLCNTGDKPVFSRHGLLTTVAYKLGPQAP--T 332
                       |:|..:      .|:....||.:|.|         |.:...:...:....|  |
  Rat   123 VSTSVGSEHYVSILSFV------DKDLLEPGCSVLLN---------HKVHAVIGVLMDDTDPLVT 172

  Fly   333 IYAIEGAVSVAGHALSWLQNKVRILPDSRD-----AEKYAEM--VPTSGDVYFVPAFTG 384
            :..:|.|.......:..|.|:::.:.:|.:     .|.|.||  .|..|.:.:.|..||
  Rat   173 VMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTG 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_647655.1 glycerol_kin 31..533 CDD:273549 43/189 (23%)
Psmc1NP_476464.1 PTZ00361 1..440 CDD:185575 43/189 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..104 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

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