DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk2 and KATNA1

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_008975.1 Gene:KATNA1 / 11104 HGNCID:6216 Length:491 Species:Homo sapiens


Alignment Length:140 Identity:28/140 - (20%)
Similarity:62/140 - (44%) Gaps:18/140 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SKELRKQSLIQHTGLVGVI--DEGTKTIGFSIYTT-P-DFKEIAAHRVELSVITPQDGWYEQDPL 78
            |:.::.:.|:|..|:.|..  |:.:|.:.....|. | |..|....|:|..:..|......::.|
Human   326 SRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREEL 390

  Fly    79 EMMA--SINKCAEEAIKQLPE--QGFSASDIVTVGITNQRETTIV-----WDAVTGKPLYNALLW 134
            ..::  .:....:..:..:.|  :|:|.:||..|    .|:.:::     .:.:|.:.:.| |..
Human   391 LRISLRELELADDVDLASIAENMEGYSGADITNV----CRDASLMAMRRRIEGLTPEEIRN-LSK 450

  Fly   135 KDIRTSTTVE 144
            :::...||:|
Human   451 EEMHMPTTME 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 25/127 (20%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 25/127 (20%)
KATNA1NP_008975.1 Interaction with microtubules 1..185
Interaction with dynein and NDEL1. /evidence=ECO:0000250 1..75
Interaction with KATNB1. /evidence=ECO:0000269|PubMed:10751153 1..29
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 87..185
AAA 241..382 CDD:214640 14/55 (25%)
AAA 245..381 CDD:278434 13/54 (24%)
Vps4_C <456..489 CDD:286426 3/5 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.