DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk2 and gk5

DIOPT Version :9

Sequence 1:NP_001286904.1 Gene:Gk2 / 38221 FlyBaseID:FBgn0035266 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_004917888.1 Gene:gk5 / 101734558 XenbaseID:XB-GENE-983229 Length:561 Species:Xenopus tropicalis


Alignment Length:571 Identity:159/571 - (27%)
Similarity:272/571 - (47%) Gaps:62/571 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LVGVIDEGTKTIGFSIYTTPDFKEIAAHRVELSVITPQDGWYEQDPLEMMASINKCAEEAIKQLP 96
            |:..:|.|:..:...:|.... :...:...:|.|:.||.|:.|.||..:........:||||   
 Frog    12 LIVAVDVGSSVLRCHLYNQAG-QICGSAEDKLKVLYPQTGYVEIDPESLWDQFVGIVKEAIK--- 72

  Fly    97 EQGFSASDIVTVGITNQRETTIVWDAVTGKPLYNALLWKDIR--------TSTTVEQIVAKVQDP 153
            :.|...|.:..:||:.||.|.|.|:..||:|.:|.:.|:|:|        .|:.:.:.|..|...
 Frog    73 DAGIQMSQVAGLGISTQRATFITWNKTTGEPFHNFISWQDLRAADLVSSWNSSVLLKAVHGVCTA 137

  Fly   154 NH-------FRSSTGLPISTYFSALKIRWLRDNVPEVRQAIRERRCKAGTVDSWIVWNLTNGALH 211
            .|       |.:::.:..:|...:|::.|:..|:|:|||..:...|..||:|:|:::.||:|.:.
 Frog   138 LHFFTRRKRFLAASLINFTTQHVSLRLVWVLQNIPQVRQEAKIGNCCFGTIDTWLLYKLTSGTVF 202

  Fly   212 ITDVTNASRTLLMNLETQAWDPVLLKTFGIREEMLPTIHSCSEIFGK----ITSERSPLRGMTLS 272
            .||.:|||.|.:.:.....|...|.....|...:.|::...|..||.    |.....|:|     
 Frog   203 ATDYSNASGTAIFDPYLMCWSSFLCSLLSIPMSIFPSVEDTSHNFGLADPIIFGAAVPIR----- 262

  Fly   273 GIMGNQQASLLGQMCVKPGQTKNTYRSGCFLLCNTGDKPVFSRHGLLTTVAYKLGPQAPTIYAIE 337
            .::.:|||::.||.|...|..|.|..:|.|:..|||::...|..||...:.:|:|.:  .:...|
 Frog   263 ALVADQQAAMFGQCCFDVGNVKLTMGTGSFISINTGERLHTSIAGLYPLIGWKIGKE--VVCLAE 325

  Fly   338 GAVSVAGHALSWLQNKVRILPDSRDAEKYAEMVPTSGDVYFVPAFTGLYAPYWRQNARGIIIGLT 402
            |..|..|.|:.|.: ::.:.....|.|..|..||..|.:||||:|:||.||.....|....:||.
 Frog   326 GNASDTGTAIKWAE-ELNLFTSVADTEAMARSVPDCGGIYFVPSFSGLQAPVNDPYACASFMGLK 389

  Fly   403 QFTRKNHIVRAALESICFQTRDILECMHQECGYEINKLHADGKLTTNNLLMQLQADTIGMPVFRS 467
            ..|.|||:|||.|||:.::.:.:.:.:.:|....|..:.|||.::.||.:||:.||.:|..:.:.
 Frog   390 PSTSKNHLVRAILESVAYRNKQLYDTVLRETTIPITLIRADGGVSNNNFIMQMTADLLGQTIDKP 454

  Fly   468 QLMDSTAFGAAMCAAQADGV------------NLCQFEPEKRYYENVHYDTFLATTTDVERKERY 520
            :..|.::.|||..|..|.|:            ..|:|||:.::.|   |:            :..
 Frog   455 KHTDMSSLGAAFLAGLAVGLWSTKDELKKLRTTQCEFEPQAKWKE---YE------------QSM 504

  Fly   521 GKWKRAVERSLGWVIKQKKTREYTE--ENYRMLSSLPASIFLISSFAMLVH 569
            |.|:.|::|...|.......:..|.  :..|:.::|....:|:  |.:|:|
 Frog   505 GSWEVALQRCSNWYNTTAARKSLTAWFQPVRVWNALGWFFWLV--FLLLLH 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk2NP_001286904.1 glycerol_kin 31..533 CDD:273549 151/531 (28%)
FGGY_GK1-3_metazoa 31..533 CDD:212664 151/531 (28%)
gk5XP_004917888.1 FGGY_GK5_metazoa 13..514 CDD:212665 149/527 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352321at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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