DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oseg4 and wdr35

DIOPT Version :9

Sequence 1:NP_001261278.1 Gene:Oseg4 / 38219 FlyBaseID:FBgn0035264 Length:1205 Species:Drosophila melanogaster
Sequence 2:NP_001139061.1 Gene:wdr35 / 565515 ZFINID:ZDB-GENE-060810-148 Length:1203 Species:Danio rerio


Alignment Length:1241 Identity:586/1241 - (47%)
Similarity:807/1241 - (65%) Gaps:82/1241 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFVYLSKKIAIPNNVKLNCIAWNKEEGYIAVAGTDGLLKVLKLDQATPNGQSKGGLAAVSNLSMN 65
            ||:|||||||||||..|.|::|||::|:||..|.|||||||||:..|.:.:.| ||||.||||||
Zfish     1 MFIYLSKKIAIPNNTVLKCVSWNKDQGFIACGGEDGLLKVLKLETYTDDAKLK-GLAAPSNLSMN 64

  Fly    66 QTLDGHKESVRVVTWNDAQQKLTSSDTDGVIMVWMLYKGSWYEEMTNDRKKSTVASMSWTSDGSR 130
            |||:||..:|:|||||:..||||:||.:|:|:|||||||||||||.|:|.||.|.||||.:||.:
Zfish    65 QTLEGHSGAVQVVTWNEQYQKLTTSDQNGLIIVWMLYKGSWYEEMINNRNKSVVRSMSWNADGLK 129

  Fly   131 ICIVYEDGAIIVGSVDGNRIFGKELKGTHLTGVQWSPDNRLILFALANGECHLYDNQGNFAMKLH 195
            |||||||||:||||||||||:|||||||.|..|.||||::::||.:||||.|:|||||||.||:.
Zfish   130 ICIVYEDGAVIVGSVDGNRIWGKELKGTQLAHVAWSPDSKILLFGMANGEIHIYDNQGNFIMKMS 194

  Fly   196 IQCV-NISGGSSSRGHRIASICWFSG-RVVQSRKRPVLAICYENGRVQIMRNENDDAPAIFDTGM 258
            :.|: |::|..|     ||.|.|:.| ......:.|.||:|:.||..|:||:|:||:|.|.:|||
Zfish   195 MSCLANVTGALS-----IAGIHWYPGTEGYLEPECPCLAVCFTNGHCQVMRHESDDSPVIIETGM 254

  Fly   259 RNV-DAKWNHDGTVLAICGTTLDAVSPTSQRDTNQVCFYSPLGKIYRTLKVPGTDITSLSWEGKS 322
            .|| ..:|||.|:||||.|:..::   .::::.|.|.||:|.|:..|||||||..:|::||||..
Zfish   255 WNVASIQWNHCGSVLAIAGSLRNS---GAEKEMNVVHFYTPFGEHLRTLKVPGKQMTAVSWEGGG 316

  Fly   323 LRIAMAVDSFIYFANIRPDYIWCYFEKTVVFLNSGSATRESPMSV-ITFWNTVSNQSFLKEVEPT 386
            |||.:||||:||||||||||.|.|...|||:    :.||...:.. :.||:|.:|:.|:|.|:..
Zfish   317 LRIGLAVDSYIYFANIRPDYKWGYCSNTVVY----AYTRPDRLEYSVVFWDTKNNERFVKYVKSL 377

  Fly   387 LCLASSSEHCVLGVECVSSNIKE---------IALSTLENRSNPAD---DRVYQLLLCNSIGTTV 439
            :.:.:..:.|:|..:...::.:|         :|.:.|.|::...|   .|.|.|:|||||||..
Zfish   378 MSITTCGDFCILATKADDTHPQEDTEAEAGSAMAFNELSNQNTSKDRSKRRKYVLVLCNSIGTPQ 442

  Fly   440 DSKYTDIRPCFVGINSSYVAIASQEEILIWHYHTPKSASTL---HNVKARKEKR---FHIDDTPT 498
            ||||.||.|.||.:..::|..||:|...||.|...|..:.|   ...|.|||.|   :||||:|:
Zfish   443 DSKYIDIDPLFVTMTKTHVIAASREAFYIWQYRVAKKLTALEINQVTKTRKEGRERVYHIDDSPS 507

  Fly   499 GVEMAKDLMLSSSSGDG----HSTQRGISDPICALALSEKLLLVARESGAINEYSIANVALRNRH 559
            |            :.||    ........||||.:..|:|:|||.||||.:..||:.|::|..::
Zfish   508 G------------TSDGTLNFAKAFTATRDPICCITASDKMLLVGRESGILQRYSLPNISLLQKY 560

  Fly   560 LMNAKVYKMAINCNSTRAAIIDHMGVMTLLDLD--------DNRETQLNFSRVERKDVWAVSWAT 616
            .:.::.|::::||||:|.||||..||:|.||::        :...|..:.|:.||||||.:.||.
Zfish   561 SLTSRPYQLSLNCNSSRLAIIDITGVLTFLDVETRGSMGDAEGGSTAGDPSKFERKDVWDMKWAN 625

  Fly   617 DNPLLLALMEKTRMYIFRGNDPEEPVSCSGYICTFEDLEITSVLLDDIISVGELQNFSHIIQLRV 681
            |||.|.::|||||||:||..|||||:..||:||.||||||.|||||:|:...::.|..:::...:
Zfish   626 DNPDLFSMMEKTRMYVFRNLDPEEPIQTSGFICHFEDLEIKSVLLDEIMRDPDVPNKDYLMNFEI 690

  Fly   682 KSLRDTDDLLEHVGLEDAKQFIEDNPHPRLWRLLAESALKKLELETAENAFVRCAHYPGIKLVKR 746
            :||||:..|:|.||:|||.|||||||||||||||||:||:||:|:.||.|||||..|.||:.|||
Zfish   691 RSLRDSRALIEKVGIEDASQFIEDNPHPRLWRLLAEAALQKLDLKMAEQAFVRCRDYQGIEFVKR 755

  Fly   747 LRTIHSKELQRAEISAFYGEFEEAEKLYLDADRRDLAIELRMTLCDWFRVVQLYRMGGSGVSDQQ 811
            |..:.|:.:::||::|::..|||||::|||.|||||||.||:.|.|||||:||.:.|.....|..
Zfish   756 LSNLQSEAMKQAEVAAYFSRFEEAERMYLDMDRRDLAISLRIKLGDWFRVLQLLKTGSGDSDDAL 820

  Fly   812 MEIAWREIGHHFANLRSWESAREYYEKSHYLEGYMEALYHLEQFDDLEKCVERLPEKSPLLPKLA 876
            :|.|:..||.:||:.:.|.:|.:||.:....|...|..|.||.:|.||:....|||...|||.:.
Zfish   821 LEQAYNAIGDYFADRQKWLNAVQYYLQGRNQERLAECYYMLEDYDGLERLANSLPENHKLLPDIG 885

  Fly   877 EMLASVGMCSEAVQAHLRFGDQKAAVATCVNLRQWGEAVELAQRFQLPQVQTLIAKHAAQLLQEG 941
            :|..:||||.:||.|.|:....||||..||:|.||.:|||||:...:.::..|::|:|:.||::.
Zfish   886 QMFVTVGMCEQAVSAFLKCNQPKAAVDACVHLNQWNKAVELAKNHSMKEIGPLLSKYASHLLEKN 950

  Fly   942 RLKEAIEMQRNAGRHLDAARLLSQMAEREQEKRAPLLRIKKLYVLAALLAEEHLKAVATTEIDYA 1006
            :..||:|:.|.|...||||:|:.::||.|.:||...||:||||||||||.|:....:.:::....
Zfish   951 KTLEAVELYRKAHHFLDAAKLMYKIAEEEAKKRTRPLRVKKLYVLAALLVEDFHTQIKSSQQSKT 1015

  Fly  1007 SGRNT---------LLDSIALEDAAAIERLWHCAEAYHFMLLAQRQLRFGIVHSAVVTAVRLRDY 1062
            .|:.:         |.:..:..|:..::..|..||||||.|||||||..|.|.:|:.||:.||||
Zfish  1016 KGKKSEATSALAGLLEEDESSSDSRILDDAWRGAEAYHFFLLAQRQLYDGKVDAAMRTALHLRDY 1080

  Fly  1063 EDVLPPEHIYSLLALASCADRAFGTCSKAFMKLEQQAHLPEATLQRYEELAAGIFAKYDPEDTTG 1127
            ||::|...||||||:.|.|:.||||||:||:|||....|.....|.||:||..||.|:.|.||..
Zfish  1081 EDIIPAVEIYSLLAICSSANGAFGTCSRAFIKLESLETLTPDQRQLYEDLALEIFTKHSPRDTRQ 1145

  Fly  1128 DRVDCYSCGVPVPDSSPSCPECNARFPACISSGKPITQPTNNIWICTTCHHCAAPTEISRHRTCP 1192
            .:.|..:.|          ||  .:.|.||.:|:.|::  ...|:|:.|.|||...||::...||
Zfish  1146 SQRDSLTEG----------PE--GKLPTCIVTGRVISE--YQFWMCSVCKHCALEQEITQQNFCP 1196

  Fly  1193 LCHSLI 1198
            ||||.:
Zfish  1197 LCHSTV 1202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oseg4NP_001261278.1 WD40 <7..217 CDD:225201 136/210 (65%)
WD40 <18..242 CDD:295369 135/225 (60%)
WD40 repeat 19..70 CDD:293791 32/50 (64%)
WD40 repeat 76..115 CDD:293791 27/38 (71%)
WD40 repeat 119..152 CDD:293791 26/32 (81%)
WD40 repeat 161..202 CDD:293791 23/41 (56%)
WD40 repeat 212..280 CDD:293791 33/69 (48%)
WD40 repeat 290..333 CDD:293791 25/42 (60%)
WD40 341..687 CDD:225201 144/376 (38%)
TPR repeat 815..838 CDD:276809 9/22 (41%)
TPR repeat 839..864 CDD:276809 8/24 (33%)
TPR repeat 869..894 CDD:276809 11/24 (46%)
YscO 877..980 CDD:284686 44/102 (43%)
DUF3505 1163..>1188 CDD:288836 9/24 (38%)
wdr35NP_001139061.1 WD40 <7..184 CDD:225201 120/177 (68%)
WD40 repeat 18..69 CDD:293791 32/51 (63%)
WD40 <19..184 CDD:295369 111/165 (67%)
WD40 repeat 74..111 CDD:293791 27/36 (75%)
WD40 repeat 119..155 CDD:293791 28/35 (80%)
Coatomer_WDAD <705..770 CDD:281977 42/64 (66%)
TPR repeat 823..850 CDD:276809 9/26 (35%)
Clathrin <851..953 CDD:279031 42/101 (42%)
TPR repeat 878..904 CDD:276809 12/25 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595612
Domainoid 1 1.000 822 1.000 Domainoid score I67
eggNOG 1 0.900 - - E1_KOG2041
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10814
Inparanoid 1 1.050 1104 1.000 Inparanoid score I224
OMA 1 1.010 - - QHG56447
OrthoDB 1 1.010 - - D91334at33208
OrthoFinder 1 1.000 - - FOG0006996
OrthoInspector 1 1.000 - - oto41051
orthoMCL 1 0.900 - - OOG6_103988
Panther 1 1.100 - - LDO PTHR16517
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3735
SonicParanoid 1 1.000 - - X5088
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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