DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oseg4 and Wdr35

DIOPT Version :10

Sequence 1:NP_647653.1 Gene:Oseg4 / 38219 FlyBaseID:FBgn0035264 Length:1205 Species:Drosophila melanogaster
Sequence 2:XP_006239947.1 Gene:Wdr35 / 503018 RGDID:1564116 Length:1181 Species:Rattus norvegicus


Alignment Length:1232 Identity:587/1232 - (47%)
Similarity:791/1232 - (64%) Gaps:86/1232 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFVYLSKKIAIPNNVKLNCIAWNKEEGYIAVAGTDGLLKVLKLDQATPNGQSKGGLAAVSNLSMN 65
            ||.|||||||:||||||.||:|||::|:||..|.|||||||:|:..|.:.:.: ||||.||||||
  Rat     1 MFFYLSKKIAVPNNVKLKCISWNKDQGFIACGGEDGLLKVLRLETQTDDSKLR-GLAAPSNLSMN 64

  Fly    66 QTLDGHKESVRVVTWNDAQQKLTSSDTDGVIMVWMLYKGSWYEEMTNDRKKSTVASMSWTSDGSR 130
            |.|:||..:|:|||||:..||||:||.:|:|:|||||||||||||.|:|.||.|.||||.:||.:
  Rat    65 QNLEGHSGAVQVVTWNEQYQKLTTSDQNGLIIVWMLYKGSWYEEMINNRNKSVVRSMSWNADGQK 129

  Fly   131 ICIVYEDGAIIVGSVDGNRIFGKELKGTHLTGVQWSPDNRLILFALANGECHLYDNQGNFAMKLH 195
            |||||||||:||||||||||:||:|||..|..|.||.|::::||.:||||.|:|||||||.||:.
  Rat   130 ICIVYEDGAVIVGSVDGNRIWGKDLKGIQLCHVTWSADSKILLFGMANGEIHIYDNQGNFIMKMK 194

  Fly   196 IQC-VNISGGSSSRGHRIASICWFSGR--VVQSRKRPVLAICYENGRVQIMRNENDDAPAIFDTG 257
            :.| ||::|..|     ||.|.|:.|.  .|:. ..|.||||::|||.||||:|||..|.:.|||
  Rat   195 LNCLVNVTGAIS-----IAGIHWYHGTEGYVEP-DCPCLAICFDNGRCQIMRHENDQNPVLIDTG 253

  Fly   258 MRNVDAKWNHDGTVLAICGTTLDAVSPTSQRDTNQVCFYSPLGKIYRTLKVPGTDITSLSWEGKS 322
            |..|..:|||.|:|||:.|:....   |..:|.|.|.||:|.|:...||||||..:.||||||..
  Rat   254 MYVVGIQWNHIGSVLAVAGSQKVV---TQDKDVNIVQFYTPFGEHLGTLKVPGKQMCSLSWEGGG 315

  Fly   323 LRIAMAVDSFIYFANIRPDYIWCYFEKTVVFLNSGSATR-ESPMSVITFWNTVSNQSFLKEVEPT 386
            |:||:|||||||||||||||.|.|...|||:    :.|| :.|...:.||:|.:|:.::|.|:..
  Rat   316 LKIALAVDSFIYFANIRPDYKWGYCSNTVVY----AYTRPDRPEYCVVFWDTKNNEKYVKYVKSL 376

  Fly   387 LCLASSSEHCVLGVECVSSNIKEIALSTLENRSNPADDR-------VYQLLLCNSIGTTVDSKYT 444
            :.:.:..:.|:              |:|..:.::|.::.       .:.|:|||||||.:|.||.
  Rat   377 ISITTCGDFCI--------------LATKADENHPQEENEMETFGATFVLVLCNSIGTPLDPKYI 427

  Fly   445 DIRPCFVGINSSYVAIASQEEILIWHYHTPKSASTL---HNVKARKEKR---FHIDDTPTGVEMA 503
            |:.|.||.:..::|..||:|.:..|.|...|..:.|   ...::|||.|   :|:||.|:|    
  Rat   428 DLVPLFVAMTKTHVIAASKEALYTWQYRVAKKLTALEINQITRSRKEGRERIYHVDDVPSG---- 488

  Fly   504 KDLMLSSSSG--DGHSTQRGISDPICALALSEKLLLVARESGAINEYSIANVALRNRHLMNAKVY 566
                  |..|  |.....:|..|||||:..|:|.|:|.||||.|..||..||||..::.::.:..
  Rat   489 ------SVDGVFDYSKAIQGTRDPICAITASDKTLIVGRESGVIQRYSFPNVALIQKYSLDCRAC 547

  Fly   567 KMAINCNSTRAAIIDHMGVMTLLDLD----DNRETQL--NFSRVERKDVWAVSWATDNPLLLALM 625
            ::::||||:|.||||..||:|..|||    |:...|:  ...::||||||.:.||.|||.|.|:|
  Rat   548 QLSLNCNSSRLAIIDIAGVLTFFDLDTRVTDSTGQQVVGELLKLERKDVWDMKWAKDNPDLFAMM 612

  Fly   626 EKTRMYIFRGNDPEEPVSCSGYICTFEDLEITSVLLDDIISVGELQNFSHIIQLRVKSLRDTDDL 690
            ||||||:||..|||||:..|||||.||||||.|||||:|:...|..:..:|:...::||||:..|
  Rat   613 EKTRMYVFRNLDPEEPIQTSGYICNFEDLEIKSVLLDEILKNPEHPSKDYIMNFEIRSLRDSRAL 677

  Fly   691 LEHVGLEDAKQFIEDNPHPRLWRLLAESALKKLELETAENAFVRCAHYPGIKLVKRLRTIHSKEL 755
            :|.||:|||.|||||||||||||||||:||:||:|.||:.|||||..|.|||.||||..:.|:.:
  Rat   678 IEKVGIEDASQFIEDNPHPRLWRLLAEAALQKLDLYTAQQAFVRCKDYQGIKFVKRLGNLQSESM 742

  Fly   756 QRAEISAFYGEFEEAEKLYLDADRRDLAIELRMTLCDWFRVVQLYRMGGSGVSDQQMEIAWREIG 820
            ::||:.|::|.|||||::|||.|||||||.||:.|.|||||:||.:.|.....|..:|.|...||
  Rat   743 KQAEVIAYFGRFEEAERMYLDMDRRDLAIGLRLKLGDWFRVLQLLKTGSGDADDSLLEQAHNAIG 807

  Fly   821 HHFANLRSWESAREYYEKSHYLEGYMEALYHLEQFDDLEKCVERLPEKSPLLPKLAEMLASVGMC 885
            .:||:.:.|.:|.:||.|....|...|..|.||.::.||.....|||...|||::|:|...||||
  Rat   808 DYFADRQKWMNAVQYYVKGRNQERLAECYYMLEDYEGLENLANSLPENHKLLPEIAQMFVRVGMC 872

  Fly   886 SEAVQAHLRFGDQKAAVATCVNLRQWGEAVELAQRFQLPQVQTLIAKHAAQLLQEGRLKEAIEMQ 950
            .:||.|.|:....||||.|||:|.||.:|||||:...:.::.:|:|::|:.||::.:..:|||:.
  Rat   873 EQAVSAFLKCNQPKAAVDTCVHLNQWNKAVELAKSHSMKEIGSLLARYASHLLEKNKTLDAIELY 937

  Fly   951 RNAGRHLDAARLLSQMAEREQEKRAPLLRIKKLYVLAALLAEEHLKAVATTEIDYASGRNT---- 1011
            |.|....|||:|:.::|:.|.:||...||:||||||:|||.|::.:.:...:.....|:|:    
  Rat   938 RKASYFFDAAKLMYKIADEEAKKRTKPLRVKKLYVLSALLIEQYHEQMKNAQRGKVKGKNSEATS 1002

  Fly  1012 ----LLDSIALEDAAAI-ERLWHCAEAYHFMLLAQRQLRFGIVHSAVVTAVRLRDYEDVLPPEHI 1071
                ||:...|...:.. :..|..||||||.:||||||..|.|.:|:.||:.||||||::|...|
  Rat  1003 ALAGLLEEEVLSTTSRFTDNAWRGAEAYHFFILAQRQLYEGYVDTALKTALHLRDYEDIIPSVEI 1067

  Fly  1072 YSLLALASCADRAFGTCSKAFMKLEQQAHLPEATLQRYEELAAGIFAKYDPEDTTGDRVDCYSCG 1136
            ||||||.:||.||||||||||:|||....|.....|:||:||..||.|:.|:|.....::....|
  Rat  1068 YSLLALCACASRAFGTCSKAFIKLESLETLSAEQKQQYEDLALEIFTKHTPKDNRKSELNSLLEG 1132

  Fly  1137 VPVPDSSPSCPECNARFPACISSGKPITQPTNNIWICTTCHHCAAPTEISRHRTCPLCHSLI 1198
                        ...:.|.||::|.||.:  ...|:|..|.|.....|||.:..||||||.:
  Rat  1133 ------------GEGKLPTCIATGSPIIE--YQFWVCKVCKHYVLAQEISNYNFCPLCHSSV 1180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oseg4NP_647653.1 WD40 <18..318 CDD:441893 171/302 (57%)
WD40 repeat 19..70 CDD:293791 30/50 (60%)
WD40 repeat 76..115 CDD:293791 27/38 (71%)
WD40 repeat 119..152 CDD:293791 26/32 (81%)
WD40 repeat 161..202 CDD:293791 23/41 (56%)
WD40 repeat 212..280 CDD:293791 35/69 (51%)
WD40 repeat 290..333 CDD:293791 25/42 (60%)
COG3899 <710..1118 CDD:443106 198/416 (48%)
Wdr35XP_006239947.1 WD40 repeat 18..69 CDD:293791 30/51 (59%)
WD40 <19..>184 CDD:441893 106/165 (64%)
WD40 67..>316 CDD:475233 146/257 (57%)
WD40 repeat 74..111 CDD:293791 27/36 (75%)
WD40 repeat 205..251 CDD:293791 23/51 (45%)
WD40 repeat 256..300 CDD:293791 18/46 (39%)
WD40 repeat 308..345 CDD:293791 27/36 (75%)
LapB 769..>940 CDD:442196 73/170 (43%)

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