DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oseg4 and Oseg1

DIOPT Version :10

Sequence 1:NP_647653.1 Gene:Oseg4 / 38219 FlyBaseID:FBgn0035264 Length:1205 Species:Drosophila melanogaster
Sequence 2:NP_648221.3 Gene:Oseg1 / 38957 FlyBaseID:FBgn0265102 Length:1169 Species:Drosophila melanogaster


Alignment Length:1293 Identity:239/1293 - (18%)
Similarity:447/1293 - (34%) Gaps:417/1293 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KKIAIPNN----VKLNCIAWNKEEGYIAVAGTDGLLKVLKLDQATPNGQSKGGLAAVSNLSMNQT 67
            ::|..||:    :.::.:.:..:...:.||..|.||..      .||           :.|:..|
  Fly     9 ERIEFPNSKDNEISVHNVCYAPDGSQLVVAAGDRLLIY------DPN-----------DGSLLNT 56

  Fly    68 LDGHKESVRVVTWNDAQQKLTSSDTDGVIMVW-------MLYK-GSWYEEMTNDRKKSTVASMS- 123
            |..||::|..|.::...::..|..:|.:::||       :.|. |...:.|:.:.....:||.| 
  Fly    57 LKAHKDTVNCVAYSRDGKRFASGASDKMVIVWSPQLEGLLKYSHGDSIQCMSFNPVSHHLASCSL 121

  Fly   124 -----WTSDGSRICIVYEDGAIIVGSVDGNRIFGKELKGTHLTGVQWSPDNRLILFALANGECHL 183
                 |::|                    .:...|......:.|..|:.|.:.::..||||...:
  Fly   122 SDFAFWSAD--------------------QKAVQKYKISARVNGCSWTNDGQYLILGLANGTISI 166

  Fly   184 YDNQGNFAMKL-----------HIQCVNISGGSSSRGHRIASICW--------FSGRVVQSRKR- 228
            .:..|....::           .:||...||..|.  ..|..:.|        .||:::...:. 
  Fly   167 RNKLGEEKGRIDRPGGPNSNVFSVQCCPASGPGSV--DTIGVVDWSQTLSFHTLSGQMIGKERTL 229

  Fly   229 ---PVLAICYENGRVQIMRNENDDAPAIFDTGMRNVDAKWNHDGTVLAICGTTLD------AVSP 284
               |:....:.||...::..         .||..:.   :..:|..|...|.|.|      |:.|
  Fly   230 GFDPLCLQYFPNGEFCLVGG---------CTGGLHF---FTREGIRLGTLGDTFDTWIWTVALHP 282

  Fly   285 TSQ------RDTNQVCFYSPLGKIYRTLKVPGTDITSLSWEGKSLRIAMAVDSFIYFANIRPDYI 343
            ..|      :|....||                                         ||....:
  Fly   283 NGQSYTIGCQDGTLACF-----------------------------------------NIASSTV 306

  Fly   344 WCYFEKTVVFLNSGSATRESPMSVITFWNTVSNQSFLKEVEPTLCLASSSEHCVLG----VECVS 404
            ...:.:...|       ||:...||.                        :|.:.|    ::| .
  Fly   307 HALYRERYAF-------RENMCDVII------------------------QHLISGQKVRIKC-R 339

  Fly   405 SNIKEIALSTLENRSNPADDRVYQLLLCNSIGTTVDSKYTDIRPCFVGINSSYVAIASQEEILIW 469
            ..:::||:  ..||                                       :|:...|.::::
  Fly   340 DLVQKIAI--YRNR---------------------------------------LAVQLPERVVLY 363

  Fly   470 HYHTPKSASTLHNVKARKEKRF----------HIDDTPTGVEMAKDLMLSSSSGDGHSTQRGISD 524
            ...:.:.....:.|:.:.:::|          ||       .:.::..|......|...:..|.|
  Fly   364 ELSSGEDQPMHYKVREKIQQKFDCSLLVVCGRHI-------VLCQEKRLQCLDFMGVLQREWIMD 421

  Fly   525 ------PICALALSEKLLLVARESGAINEYSIANVALRNRHLMNAKVYKMAINC---NSTRA--A 578
                  .:....:..:.|:|..::|     .:..:.|.|...:.......|:.|   ||.|:  |
  Fly   422 SFIRYIKVTGGPVGREGLMVGLKNG-----QVFRIFLNNSLPLLITTAVSAVRCLDINSKRSKIA 481

  Fly   579 IIDHMGVMTLLDLDDN----RETQLNFSRVERKDVWAVSWATDNPLLLALMEKTRMYIFR-GN-D 637
            ::|.:|.:.:.|:.::    ::|.:|          :|:|.|....:|.....|.....| || .
  Fly   482 VVDDVGRLVVRDVINDTILYQDTGVN----------SVTWNTHLDSMLCYTHTTGGLSVRVGNLP 536

  Fly   638 PEEPVSCSGYI---CTFEDLEIT-SVLLDDIISVG-------ELQNFSHIIQLRVKSLRDTDDLL 691
            |..|.:..|.:   |......:. :::.:..:::|       |...|....|:....:..:|   
  Fly   537 PRAPQNMHGVVVGLCGATAFCLRGNIMHNTPLALGSTMWQFIEAGLFDEAYQVACLGVTTSD--- 598

  Fly   692 EHVGLEDAKQFIEDNPHPRLWRLLAESALKKLELETAENAFVRCAHYPGIKLVKRL-----RTIH 751
                                |..||:|||:.|.:..|.:|:|:..:.|.:||:..|     |:..
  Fly   599 --------------------WEGLAQSALEALHINIARDAYVKVRNLPWLKLIGELRDQQQRSAV 643

  Fly   752 SKELQRAEISAFYGEFEEAEKLYLDADRRDLAIE----LRMTLCDWFRVVQLYRMGGSGVSDQQM 812
            .||:..||..||.|:|:||.:|:|...:...|:|    |||     |.:.|.|...|   :||:.
  Fly   644 PKEVLLAENCAFAGKFKEAARLFLKCGQSSRALEMYTDLRM-----FDLAQEYIKDG---TDQEK 700

  Fly   813 EIAWREIGHHFANLRSWESAREYY------EKSHYL---EGYMEALY------HLEQFDDLEKCV 862
            :...|:......:::...:|.|..      :|:..:   :|:.:.||      .|.:.|.||...
  Fly   701 KELVRKRAEWAYSVKEPRAAAELLLSAGENQKAIDIVAEQGWADVLYDIGRRLSLTERDSLESVA 765

  Fly   863 ERLPEKSPLLPKLAEMLASVGMCSEAVQAHLRFGDQKAAVATCVNLRQWGEAVELAQRFQLPQ-V 926
            :.| :....||..||:...:|..::.||.|             :.:|.|.||..||:  .||: :
  Fly   766 QNL-KTLKALPLAAEIFKKLGDEAQVVQLH-------------IEVRDWPEAFRLAE--SLPELL 814

  Fly   927 QTLIAKHAAQLLQEGRLKEAIEMQRNAGRHLDAARLLSQMAEREQEKRAPLLRIKKLYVLAA--- 988
            .|:..:|...|.:..:..||.:....|||..:|.|||.|::.        ...:::.|:.|:   
  Fly   815 PTVHYQHGQWLAETDQFIEAHQAYIKAGRTKEANRLLKQLSN--------TAIVEERYLDASYFY 871

  Fly   989 -LLAEEHLKAVATTEIDYASGRNTLLDSIALEDAAAIERLWHCAEAYHFMLLAQRQLRFGIV--- 1049
             |||::||      ::.:|......:|.             |..|..:.:.:|:....:.::   
  Fly   872 WLLAKQHL------DVYHAKEEQNPVDH-------------HLTEYKNHLRVAKVYYAYSVIYSY 917

  Fly  1050 -------HSAV----VTAVRLRDYEDVLPPEHIYSLLALASCADRA-FGTCSKAFMKLEQ--QAH 1100
                   ||.|    |:...|.:.|....|:.:.....|.:.|.:| |...:|..:.:.:  |:.
  Fly   918 MKEPFTTHSPVSLFNVSRFILNEVEHKGVPKGVSMFSVLFTLAKQAKFLQANKLCLLINKRLQSL 982

  Fly  1101 LPEATLQRYEEL--------AAGIFAKYDPEDTTGDRVDCYSC-GVPVPDSSPSCPEC 1149
            .|.|.:|...:|        .:|.   .|||:..   ..||.| ......:|..||.|
  Fly   983 KPPAGVQEQIDLNFLNSKACKSGF---NDPEELL---PLCYKCSNYSQHLNSNCCPTC 1034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oseg4NP_647653.1 WD40 <18..318 CDD:441893 60/348 (17%)
WD40 repeat 19..70 CDD:293791 10/50 (20%)
WD40 repeat 76..115 CDD:293791 8/46 (17%)
WD40 repeat 119..152 CDD:293791 5/38 (13%)
WD40 repeat 161..202 CDD:293791 10/51 (20%)
WD40 repeat 212..280 CDD:293791 13/79 (16%)
WD40 repeat 290..333 CDD:293791 2/42 (5%)
COG3899 <710..1118 CDD:443106 109/461 (24%)
Oseg1NP_648221.3 WD40 <22..296 CDD:441893 58/324 (18%)
WD40 repeat 25..59 CDD:293791 10/50 (20%)
WD40 repeat 65..99 CDD:293791 5/33 (15%)
WD40 repeat 104..136 CDD:293791 6/51 (12%)
WD40 repeat 144..214 CDD:293791 15/71 (21%)
WD40 repeat 233..267 CDD:293791 7/45 (16%)
WD40 repeat 275..301 CDD:293791 6/66 (9%)
LapB 654..910 CDD:442196 72/306 (24%)

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