DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oseg4 and ktub

DIOPT Version :10

Sequence 1:NP_647653.1 Gene:Oseg4 / 38219 FlyBaseID:FBgn0035264 Length:1205 Species:Drosophila melanogaster
Sequence 2:NP_611549.2 Gene:ktub / 37400 FlyBaseID:FBgn0015721 Length:469 Species:Drosophila melanogaster


Alignment Length:412 Identity:74/412 - (17%)
Similarity:140/412 - (33%) Gaps:123/412 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   407 IKEIALSTLENRSNPADDRVYQLLLCNSIGTTVDSKYTDIRPCFV-GINSSYVAIASQEEILIWH 470
            |..:|::|..|.||    .:..|...|..|..   .||..:...: .|:|..:.......:.:..
  Fly    81 INPVAMNTSRNHSN----NMRSLSTINQEGKW---SYTPRKADLIEEISSHELEDEESSPVTVIE 138

  Fly   471 YHTPKSASTLHNVKARKEK-RFHI-------DD------------TPTGVEMA--KDLML-SSSS 512
            .|...::.:.::.:::|.: |.|.       ||            .|.|:..:  ||..| .||:
  Fly   139 QHQQSASHSANSTQSQKPRARQHSFSDNLDEDDYTNRNVAGAAPVRPAGMASSPYKDATLDGSSN 203

  Fly   513 GDGHST------------QRGISDPI-------CALALSEKLLLVARESGAI--------NEYSI 550
            |.|:.|            .:.:..|.       |.:....|    ..:.|..        .:|..
  Fly   204 GTGNGTGGESEGDVIGNIDQFVMQPAPQGVLYKCRITRDRK----GMDRGLFPIYYLHLERDYGK 264

  Fly   551 ANVALRNRHLMNAKVYKMAINCNSTRAAIIDHMGVMTLLDLDDNRETQLNFSRVERKDVWAVSW- 614
            ....|..|....:|.....::|:.|              ||..|.:   .|....|.:|:..|: 
  Fly   265 KIFLLGGRKRKKSKTSNYIVSCDPT--------------DLSRNAD---GFCGKLRSNVFGTSFT 312

  Fly   615 --------ATDNPL--LLALMEKTRMYIFRGNDPEE-PVSCSGYICTFEDLEITSV--LLDDIIS 666
                    :|::|.  |..::..|.:..|:|  |.. .|...|.....:.::|:|.  ....|:.
  Fly   313 VFDNGNKESTESPRLDLAVIIYDTNILGFKG--PRNMTVILPGMTEDDQRVKISSADPKQQGILD 375

  Fly   667 VGELQNFSHIIQLRVKSLRDTDDLLEHVGLEDAKQFIEDNPHPRLWRLLAESALKKLEL------ 725
            :.:::|..:|::|..|:....|:...:|          .|.|.|    :.::::|..:|      
  Fly   376 LWKMKNMDNIVELHNKTPVWNDETQSYV----------LNFHGR----VTQASVKNFQLVHDSDP 426

  Fly   726 --------ETAENAFVRCAHYP 739
                    .|:|:.|.....||
  Fly   427 EYIVMQFGRTSEDVFTMDYRYP 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oseg4NP_647653.1 WD40 <18..318 CDD:441893
WD40 repeat 19..70 CDD:293791
WD40 repeat 76..115 CDD:293791
WD40 repeat 119..152 CDD:293791
WD40 repeat 161..202 CDD:293791
WD40 repeat 212..280 CDD:293791
WD40 repeat 290..333 CDD:293791
COG3899 <710..1118 CDD:443106 8/44 (18%)
ktubNP_611549.2 Tub 226..464 CDD:460094 45/260 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.