DRSC/TRiP Functional Genomics Resources

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Protein Alignment drpr and Pdgfrl

DIOPT Version :9

Sequence 1:NP_001261276.1 Gene:drpr / 38218 FlyBaseID:FBgn0027594 Length:1042 Species:Drosophila melanogaster
Sequence 2:NP_081116.3 Gene:Pdgfrl / 68797 MGIID:1916047 Length:375 Species:Mus musculus


Alignment Length:225 Identity:40/225 - (17%)
Similarity:66/225 - (29%) Gaps:84/225 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   861 QAETRLLPNNMRSK---MNNFDQRSTMSTDYGD----DCNASGRVGSYSINYNHDLLTKNLNADR 918
            |.|.|:.|.|.::|   ....|:.||.||....    ....:||       :.....|.:|.|.:
Mouse    33 QGENRIKPTNKKAKPKIPKVKDRDSTDSTAKSQSIMMQAMGNGR-------FQRPAATVSLLAGQ 90

  Fly   919 TNPI------------VYNESLKEEHVYDEIKHKEGY---------------------------- 943
            |..:            .|.::.|:..:  .:|..|.|                            
Mouse    91 TLELRCKGSKVEWSYPAYLDTFKDSRL--TVKQSERYGQLTLVNSTAADTGEFSCWEQLCNGYIC 153

  Fly   944 -KDPVKIYSKILF---------PEDEYDHLDYSRP-----------STSQKPHYHRMNDAMLNIN 987
             :|..|..|..:|         |...|..:.|..|           :.|.|...||...|     
Mouse   154 RRDEAKTGSTYIFFTEKGELFVPSPSYFDVVYLNPDRQAVVPCRVTAPSAKVTLHREFPA----- 213

  Fly   988 QDEEKPSNVKNMTVLLNKPLPPTEPEPQHE 1017
              :|.|:|..::...:.:.....:|...|:
Mouse   214 --KEIPANGTDIVYDMKRGFVYLQPHSDHQ 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drprNP_001261276.1 EMI 27..92 CDD:284877
EGF_CA 274..319 CDD:304395
DSL <479..518 CDD:302925
DSL <567..606 CDD:302925
PdgfrlNP_081116.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..63 11/29 (38%)
Ig 80..143 CDD:299845 9/64 (14%)
IG_like 83..>143 CDD:214653 9/61 (15%)
I-set 272..373 CDD:254352
Ig 293..372 CDD:299845
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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