DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drpr and PDGFRL

DIOPT Version :9

Sequence 1:NP_001261276.1 Gene:drpr / 38218 FlyBaseID:FBgn0027594 Length:1042 Species:Drosophila melanogaster
Sequence 2:NP_001359002.1 Gene:PDGFRL / 5157 HGNCID:8805 Length:375 Species:Homo sapiens


Alignment Length:239 Identity:40/239 - (16%)
Similarity:68/239 - (28%) Gaps:91/239 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   848 PPNHNFDNPVYGMQAETRLLPNN--MRSKMNNFDQRSTMSTDYGDDCNASGRVGSYSI------N 904
            |.|.....|     .|.|:.|.|  ::.|:.....|        |..|::.:..|..:      .
Human    25 PKNKRPKEP-----GENRIKPTNKKVKPKIPKMKDR--------DSANSAPKTQSIMMQVLDKGR 76

  Fly   905 YNHDLLTKNLNADRTNPI------------VYNESLKEEHVYDEIKHKEGY-------------- 943
            :.....|.:|.|.:|..:            .|.::.|:..:  .:|..|.|              
Human    77 FQKPAATLSLLAGQTVELRCKGSRIGWSYPAYLDTFKDSRL--SVKQNERYGQLTLVNSTSADTG 139

  Fly   944 ---------------KDPVKIYSKILF---------PEDEYDHLDYSRPS-----------TSQK 973
                           ||..|..|..:|         |...|..:.|..|.           .|.|
Human   140 EFSCWVQLCSGYICRKDEAKTGSTYIFFTEKGELFVPSPSYFDVVYLNPDRQAVVPCRVTVLSAK 204

  Fly   974 PHYHRMNDAMLNINQDEEKPSNVKNMTVLLNKPLPPTEPEPQHE 1017
            ...||...|       :|.|:|..::...:.:.....:|..:|:
Human   205 VTLHREFPA-------KEIPANGTDIVYDMKRGFVYLQPHSEHQ 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drprNP_001261276.1 EMI 27..92 CDD:284877
EGF_CA 274..319 CDD:304395
DSL <479..518 CDD:302925
DSL <567..606 CDD:302925
PDGFRLNP_001359002.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..64 11/51 (22%)
IG_like 83..145 CDD:214653 9/63 (14%)
Ig 293..372 CDD:386229
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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