DRSC/TRiP Functional Genomics Resources

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Protein Alignment drpr and LAMB3

DIOPT Version :10

Sequence 1:NP_001261276.1 Gene:drpr / 38218 FlyBaseID:FBgn0027594 Length:1042 Species:Drosophila melanogaster
Sequence 2:NP_000219.2 Gene:LAMB3 / 3914 HGNCID:6490 Length:1172 Species:Homo sapiens


Alignment Length:610 Identity:141/610 - (23%)
Similarity:193/610 - (31%) Gaps:252/610 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QADLKDL-------DGPNICKRRELYNVDVVYTELQSFQERGSTWCVTFPPRCSTYRIKHRVVNK 74
            |.:|.||       ....|.:..|:.|:.|.:|.|....:||      :.|..:.|         
Human   190 QLNLMDLVSGIPATQSQKIQEVGEITNLRVNFTRLAPVPQRG------YHPPSAYY--------- 239

  Fly    75 TKTIAKNRIVRDC-CDGYIASAGECVPHCSEPCQHGRCISP-------EKCKCDHGYGGPACDIN 131
              .:::.|:...| |.|:   |..|.|      :.|....|       :.|.|.|...||.|: .
Human   240 --AVSQLRLQGSCFCHGH---ADRCAP------KPGASAGPSTAVQVHDVCVCQHNTAGPNCE-R 292

  Fly   132 CPPGWYGRNCSMQCDCLNNAVCEPFSGDCECAKGYTGARCADICPEGFFGANCSEKCRCENGGK- 195
            |.|.:            ||....|       |:|.....|              ::|.| ||.. 
Human   293 CAPFY------------NNRPWRP-------AEGQDAHEC--------------QRCDC-NGHSE 323

  Fly   196 -CHHVSGECQCAPGFTGPLCDMRCPDGKHGAQCQQDCPCQNDGKCQPETGACMCNPGWTGDVCAN 259
             ||........:.|..|.:|| .|.|...|..|:         :||..             ...|
Human   324 TCHFDPAVFAASQGAYGGVCD-NCRDHTEGKNCE---------RCQLH-------------YFRN 365

  Fly   260 KCPVGSYGPGCQE---SCEC-----YKGAPCHHITGQCECPPGYRGERCFDECQLNTYGFNCSMT 316
            :.|    |...||   ||||     ..||||..:||||.|....:||||                
Human   366 RRP----GASIQETCISCECDPDGAVPGAPCDPVTGQCVCKEHVQGERC---------------- 410

  Fly   317 CDCANDAMCDRANGTCICNPGWTGAKCAERICEANKYGLDCNRTCECDMEHTDLCHPETGNCQCS 381
                           .:|.||:||      :..||..|                ||    .|.|:
Human   411 ---------------DLCKPGFTG------LTYANPQG----------------CH----RCDCN 434

  Fly   382 IGWSSAQCTRPCTFLRYGPNCELTCNCKNGAKCSPVNGTCLCAPGWRGPTCEESCEPGTFGQDCA 446
            |                       ...:....|...:|.|||.|...||.|:: |.|        
Human   435 I-----------------------LGSRRDMPCDEESGRCLCLPNVVGPKCDQ-CAP-------- 467

  Fly   447 LRCDCQNGAKCEPETGQCLCTAGWKNIKCDRPCDLNHFGQDCAKVCDCHNNAA--CNPQNGSCTC 509
            ......:|..|||                            ||  ||.||:.:  ||...|.|.|
Human   468 YHWKLASGQGCEP----------------------------CA--CDPHNSLSPQCNQFTGQCPC 502

  Fly   510 AAGWTGERCE----RKCDTGKFGHDCA---QKCQCDFNNS--LACDATNGRCVCKQDWGGVHCET 565
            ..|:.|..|.    |:|....:| |.|   :.|.|||..:  ..||..:|||:|:....|..|: 
Human   503 REGFGGLMCSAAAIRQCPDRTYG-DVATGCRACDCDFRGTEGPGCDKASGRCLCRPGLTGPRCD- 565

  Fly   566 NCRSGYYGENCDKVCRCLNNSSCDP 590
            .|:.||    |::...|:   :|.|
Human   566 QCQRGY----CNRYPVCV---ACHP 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drprNP_001261276.1 EMI 26..92 CDD:462204 14/66 (21%)
EGF_CA 274..319 CDD:473889 16/49 (33%)
gliding_CglD <451..579 CDD:468178 39/138 (28%)
DSL 567..609 CDD:473190 7/24 (29%)
LAMB3NP_000219.2 LamNT 20..248 CDD:214532 15/74 (20%)
EGF_Lam 249..304 CDD:238012 18/76 (24%)
Laminin_EGF 316..366 CDD:395007 16/73 (22%)
Laminin_EGF 379..428 CDD:395007 24/101 (24%)
Laminin_EGF 431..478 CDD:395007 15/78 (19%)
Laminin_EGF 481..534 CDD:395007 19/55 (35%)
EGF_Lam 534..576 CDD:214543 16/46 (35%)
Domain II 579..785 2/8 (25%)
GumC 626..>980 CDD:442439
Domain alpha 786..816
Domain I 817..1170
Smc <838..>1092 CDD:440809
cc_LAMB3_C 1102..1172 CDD:411974
Blue background indicates that the domain is not in the aligned region.

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