DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18171 and tcte1

DIOPT Version :9

Sequence 1:NP_647651.1 Gene:CG18171 / 38216 FlyBaseID:FBgn0035262 Length:760 Species:Drosophila melanogaster
Sequence 2:XP_009293283.1 Gene:tcte1 / 100331698 ZFINID:ZDB-GENE-120406-12 Length:450 Species:Danio rerio


Alignment Length:564 Identity:110/564 - (19%)
Similarity:182/564 - (32%) Gaps:174/564 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 VPTLADLCVRQMAKRGNANVPDEVLQDPRKMRIHYDSLDVDLPLR-ECYCVEDASYWRRVVLAKS 124
            ||.|..||::.:.|..........||...|..: ...|...|||. ....:.|.|||:|      
Zfish    39 VPLLTTLCLQHIIKHFEEKPILHELQPSFKTYV-LQRLPASLPLTITANLISDESYWKR------ 96

  Fly   125 SETCLALKGLQD---YD--WRGKGLSLKYMELVEACPAALWPEKEMTELAELIKDHVRCMDIRHL 184
              .|.|..||.|   ||  |:..........::|.........|.:.::..|.:::|:.:.:..|
Zfish    97 --CCEARWGLADISTYDNSWKQMFFERHLQSIIELFIPDTTDTKTVLDVLPLCQNYVKQLRVSQL 159

  Fly   185 QPLSEYAFRKTKREEDDSEPEITSEESGGMEISSDEPMTPEDVDEEGEEEEEGAGSIASDQKRAI 249
            .|             ...||....|:.|                                     
Zfish   160 LP-------------PIKEPSRFDEDDG------------------------------------- 174

  Fly   250 GFNTKFTLNASDDEDDSGNERRKRRHERNVARQRLRDLKAAREAEHEERRRRRSEMRKPKEPEPR 314
                      |:...|.|::.....|                                       
Zfish   175 ----------SESASDMGSDGPSMDH--------------------------------------- 190

  Fly   315 KKKKRRQRIKGTFDIRVEPEPDDGDDKVLDKRNKQRYLTHLQQLKYPEDDCVHIDLSFVRHFVNL 379
                        ||.|:          :|||      |.:|::|.             |.:.|..
Zfish   191 ------------FDFRM----------LLDK------LPNLKELS-------------VVYCVKG 214

  Fly   380 VSLNLEFLGPALGRKYHKRNVL-FSIKDMVRLARGLVALQQLQIFRLRNSRLNSFKLYTVCRALR 443
            ..:|.|:            |:. |:.:|...||:.|.:.:.||:||:..|:::..|...:...|.
Zfish   215 CGMNFEW------------NLFEFTFRDCESLAKALNSCKTLQVFRIHRSKVDDEKCCVIVNHLL 267

  Fly   444 LLPLLEVVDFGYNQMTDDCGPELGILLERPQMLKILELEYNRLDTRAMSAIGEALQRPNLSRLEY 508
            ..|.|:.:||.:|.::|.....:..||.|.| ||.|.:..|::......|:..||.:.|  .|..
Zfish   268 DHPSLQELDFSHNHISDRGARAIAKLLNRSQ-LKTLIVCNNQIRGAGAQALAHALAKNN--TLTS 329

  Fly   509 LGLAHNKLSGDSLSILCNGIKGTEHVEELNVSGIE-ANPRTIVDQLGDLLRHHDPLRRLIMVAIP 572
            |.|..|:::.:....|...:...:.:..|::.|.. ..|..:.  |...|..:..|:.|.:....
Zfish   330 LNLRLNRIADEGGQALAQALIKNKTLVNLHLGGNNMTEPAAVA--LSQALVENCALKSLNLCNNR 392

  Fly   573 LGAKLGTRLICALTANMKVTHFDCRDCDLDEQEEFEANVAVRRN 616
            |||..|..|...:|.|..:...|.|..|:|:..|:....|:..|
Zfish   393 LGADGGKVLEEGMTHNCTLVECDIRLTDVDQDSEYSICQALHAN 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18171NP_647651.1 LRR_RI <387..541 CDD:238064 37/154 (24%)
leucine-rich repeat 420..447 CDD:275380 7/26 (27%)
leucine-rich repeat 448..475 CDD:275380 8/26 (31%)
leucine-rich repeat 476..505 CDD:275380 8/28 (29%)
leucine-rich repeat 506..526 CDD:275380 5/19 (26%)
tcte1XP_009293283.1 LRR_RI 142..441 CDD:238064 82/452 (18%)
leucine-rich repeat 272..298 CDD:275380 8/25 (32%)
leucine-rich repeat 299..322 CDD:275380 6/22 (27%)
leucine-rich repeat 327..354 CDD:275380 5/26 (19%)
leucine-rich repeat 355..382 CDD:275380 5/28 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
32.870

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