DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13930 and DYNC2I2

DIOPT Version :9

Sequence 1:NP_647645.1 Gene:CG13930 / 38210 FlyBaseID:FBgn0035256 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_443076.2 Gene:DYNC2I2 / 89891 HGNCID:28296 Length:536 Species:Homo sapiens


Alignment Length:387 Identity:93/387 - (24%)
Similarity:163/387 - (42%) Gaps:58/387 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 YRLGLLWRLSPPSSDPKVHQAVSDMSFCPSNGDIMAVAYGVYSHGKVSKLPRSGWVYVWNIK--- 335
            |.||.     ||:....:|  |:.:|: .|.|.::|.|||...||..|.|  ..:|..||:.   
Human   150 YTLGY-----PPAQAQGLH--VTSISW-NSTGSVVACAYGRLDHGDWSTL--KSFVCAWNLDRRD 204

  Fly   336 -NPVNPERRYHYQVPVVTVEFSPTQPQLLAIGLHNGGVEVRDISGQDLPPLAVSQRLSSPYFEPV 399
             .|..|.........|:.:.|.||||..:|.||::|.|.|.|:|..:.|.|..:......:.:||
Human   205 LRPQQPSAVVEVPSAVLCLAFHPTQPSHVAGGLYSGEVLVWDLSRLEDPLLWRTGLTDDTHTDPV 269

  Fly   400 TAIKWIYFEGDVGCRNPHITPFLATSQAGAVTKYRLINSPNMLGLEQQRLQRAEGELEGIPIERQ 464
            :.:.|:...|     :.|....|:.:..|.|..::        |:...:||..||  ..:.:::.
Human   270 SQVVWLPEPG-----HSHRFQVLSVATDGKVLLWQ--------GIGVGQLQLTEG--FALVMQQL 319

  Fly   465 PPAASLLANRHPQ------CLEIVLDPVQSDIYYVLTDEGTLYKCS--------TNYPLQHLELR 515
            |.:..|  .:||:      ...:........::.:.|:.|...|||        |..| ..:.||
Human   320 PRSTKL--KKHPRGETEVGATAVAFSSFDPRLFILGTEGGFPLKCSLAAGEAALTRMP-SSVPLR 381

  Fly   516 -------QVHDGPAACMEFSPWSPRMYLTCGSDWCIRIWLAGILLPIVTLQHHLSPVHCARWSRT 573
                   ..|.||...:..||:...::|:.|:|..:.::......|:.:||..|..:...|||..
Human   382 APAQFTFSPHGGPIYSVSCSPFHRNLFLSAGTDGHVHLYSMLQAPPLTSLQLSLKYLFAVRWSPV 446

  Fly   574 HSTILVSLS-RSTVDIWDLRNSTMKP---VSSTVIDADIFYTTFKFTHCGRSLAVGNEAGNL 631
            ...:..:.| :..|.::||:.|:.||   :..|..::.::...|. :...:.||.|:..|.:
Human   447 RPLVFAAASGKGDVQLFDLQKSSQKPTVLIKQTQDESPVYCLEFN-SQQTQLLAAGDAQGTV 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13930NP_647645.1 WD40 <279..648 CDD:225201 90/382 (24%)
WD40 repeat 295..344 CDD:293791 17/52 (33%)
WD40 repeat 350..397 CDD:293791 16/46 (35%)
WD40 repeat 400..473 CDD:293791 13/72 (18%)
WD40 repeat 478..513 CDD:293791 7/42 (17%)
WD40 <518..>593 CDD:295369 19/75 (25%)
WD40 repeat 524..560 CDD:293791 7/35 (20%)
DYNC2I2NP_443076.2 DYNLL2 binding. /evidence=ECO:0000269|PubMed:30649997 80..93
WD40 106..516 CDD:225201 93/387 (24%)
DYNLRB1 binding. /evidence=ECO:0000269|PubMed:30649997 106..131
WD40 repeat 164..215 CDD:293791 17/53 (32%)
WD 1. /evidence=ECO:0000255 215..255 15/39 (38%)
WD40 217..515 CDD:295369 70/310 (23%)
WD40 repeat 220..264 CDD:293791 16/43 (37%)
WD 2. /evidence=ECO:0000255 264..308 10/56 (18%)
WD40 repeat 270..325 CDD:293791 12/69 (17%)
WD40 repeat 337..389 CDD:293791 9/52 (17%)
WD 3. /evidence=ECO:0000255 390..430 9/39 (23%)
WD40 repeat 396..432 CDD:293791 6/35 (17%)
WD 4. /evidence=ECO:0000255 433..473 10/39 (26%)
WD40 repeat 438..476 CDD:293791 10/37 (27%)
WD 5. /evidence=ECO:0000255 480..520 5/29 (17%)
WD40 repeat 485..512 CDD:293791 5/24 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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