DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13930 and Dync2i2

DIOPT Version :10

Sequence 1:NP_647645.1 Gene:CG13930 / 38210 FlyBaseID:FBgn0035256 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_001008498.2 Gene:Dync2i2 / 71820 MGIID:1919070 Length:537 Species:Mus musculus


Alignment Length:515 Identity:108/515 - (20%)
Similarity:188/515 - (36%) Gaps:121/515 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 KTRRTVDADTQTMTALMKSRLVNTERLTTAQMGSYVSNFEMYDTYTDLEKSTTSVQVQGAKKMEI 214
            :.|...||..||......:.:....:..|.::.:::...|.. ...:|..:..|....|      
Mouse    78 QARTHADAQVQTEAPEEPAAMAPVSQYDTLRLEAFLRRVEAM-VIRELNNNWQSHAFDG------ 135

  Fly   215 TTYHVGGVDQFVGINCLPGFRLALMLTMRILASNVFEPQQRRYRNMAPPDPLAEDVKFKYRLGLL 279
              |.|...:|...::|              |.:.|:              |||:. :..:..|:.
Mouse   136 --YEVNWTEQQQTVSC--------------LHTLVY--------------PLAQG-QGLHVTGIS 169

  Fly   280 WRLSPPSSDPKVHQAVSDMSFCPSNGDIMAVAYGVYSHGKVSKLPRSGWVYVWNI-KNPVNPERR 343
            |.                     |.|.::|.|||....|..|.|  ..:|..||: :..:||   
Mouse   170 WN---------------------STGSVLACAYGRLDDGDWSTL--KSYVCTWNLDRQGLNP--- 208

  Fly   344 YHYQVPVVTVE---------FSPTQPQLLAIGLHNGGVEVRDISGQDLPPLAVSQRLSSPYFEPV 399
               |.|.|.||         |.||||..:|.||::|.|.|.|:|..:.|.|..:......:.:||
Mouse   209 ---QQPSVVVEVPSAVMCLAFHPTQPSHIAGGLYSGEVLVWDMSRPEDPLLWRTGLTDDTHTDPV 270

  Fly   400 TAIKWIYFEGDVGCRNPHITPFLATSQAGAVTKYRLINSPNMLGLEQQRLQRAEGELEGIPIERQ 464
            ..:.|:     ...|:.|....|:.:..|.|..:|      ..|..|.||.:.    ..:.:::.
Mouse   271 YQVLWL-----PEPRHSHRFQVLSAATDGKVLLWR------GSGAGQLRLTKG----FALAVQQL 320

  Fly   465 PPAASLLANRHPQ------CLEIVLDPVQSDIYYVLTDEGTLYKCS--------TNYPLQHLELR 515
            |.:..|  .:.|:      ...:......|.::.:.|:.|...|||        |..| ..:.||
Mouse   321 PRSTKL--KKPPRGETEVGVTSVAFSSFDSSLFVLGTEGGFPLKCSLASEVAALTRMP-SSVPLR 382

  Fly   516 -------QVHDGPAACMEFSPWSPRMYLTCGSDWCIRIWLAGILLPIVTLQHHLSPVHCARWSRT 573
                   ..|.||...:..||:...::|:.|:|..:.::......|:.:||.....:...|||..
Mouse   383 APVQFTFSPHGGPVYSVSCSPFHRNLFLSAGTDGHVHLYSMLQAQPLTSLQLSHKYLFAVRWSPV 447

  Fly   574 HSTILVSLS-RSTVDIWDLRNSTMKP---VSSTVIDADIFYTTFKFTHCGRSLAVGNEAG 629
            ...:..:.| ...|.::||:.|:.||   ::.|...:.::...|. :...:.||.|:..|
Mouse   448 RPLVFAAASGEGDVQLFDLQKSSQKPTVSITQTQDGSPVYCLEFN-SQQTQLLAAGDAKG 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13930NP_647645.1 WD40 repeat 295..344 CDD:293791 14/49 (29%)
WD40 repeat 350..397 CDD:293791 18/55 (33%)
WD40 repeat 400..473 CDD:293791 13/72 (18%)
WD40 442..>629 CDD:441893 43/211 (20%)
WD40 repeat 478..513 CDD:293791 8/42 (19%)
WD40 <518..>593 CDD:475233 18/75 (24%)
WD40 repeat 524..560 CDD:293791 7/35 (20%)
Dync2i2NP_001008498.2 WD40 50..515 CDD:441893 108/515 (21%)
DYNLL2 binding. /evidence=ECO:0000250|UniProtKB:Q96EX3 80..93 5/12 (42%)
DYNLRB1 binding. /evidence=ECO:0000250|UniProtKB:Q96EX3 107..132 3/25 (12%)
WD40 repeat 165..211 CDD:293791 17/74 (23%)
WD 1. /evidence=ECO:0000255 216..256 15/39 (38%)
WD40 repeat 223..265 CDD:293791 15/41 (37%)
WD 2. /evidence=ECO:0000255 265..309 11/54 (20%)
WD40 repeat 271..312 CDD:293791 11/51 (22%)
WD40 repeat 339..389 CDD:293791 10/50 (20%)
WD 3. /evidence=ECO:0000255 391..431 9/39 (23%)
WD40 repeat 396..433 CDD:293791 6/36 (17%)
WD 4. /evidence=ECO:0000255 434..474 9/39 (23%)
WD40 repeat 439..479 CDD:293791 10/39 (26%)
WD 5. /evidence=ECO:0000255 481..521 5/27 (19%)
WD40 repeat 486..511 CDD:293791 5/22 (23%)

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