DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13930 and Dnai1

DIOPT Version :10

Sequence 1:NP_647645.1 Gene:CG13930 / 38210 FlyBaseID:FBgn0035256 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_780347.2 Gene:Dnai1 / 68922 MGIID:1916172 Length:701 Species:Mus musculus


Alignment Length:698 Identity:144/698 - (20%)
Similarity:265/698 - (37%) Gaps:167/698 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FEQLSRMIRDHPLMKEPGAEQQQLHKLRTPEYRTKCVMRASLDDIALGINLYKLQLDTPMSPTLE 78
            |.|:..:|   |...:.|..|         .||         |::..| :...:::.|..:..||
Mouse    97 FSQVGNLI---PKDSDEGRRQ---------HYR---------DEMVAG-SQESIKVVTSEAENLE 139

  Fly    79 EPNYLKEPASSARSAHSARPPATPFIKVLLRKTPIVVLFERRSMTALADTEEGRQVMEDNRKYDE 143
            |....||....|.:...|.                    .:..:.|.|:|.|  :|:|     :|
Mouse   140 EEEEPKEGEGEAEAEAEAG--------------------SQTDIPAAAETTE--KVIE-----EE 177

  Fly   144 LLSGTDKTRRTV-------DADTQTMTALMKSRLVNTERLTTAQMGSYVSNFEMYDTYTD-LEKS 200
            |::......|.:       :..:||....::.|....|........:..:.:|:||.|.| |||.
Mouse   178 LMAPVQPKERKLTNQFNFSERASQTFNNPLRDRECQMEPPPRTNFSATANQWEIYDAYVDELEKQ 242

  Fly   201 TTSVQVQGAKKMEITTYHVGGVDQFVGINCLPGFRLALMLTMRILASNVFEPQQ----------- 254
            ..:.:.:.||                    .|..:....:.||.|.|  .|.|.           
Mouse   243 EKTKEKEKAK--------------------TPVAKKTEKMAMRKLTS--MESQSDDITKVTQAAK 285

  Fly   255 --RRYRNMAPPDPLAEDVKF------KYR-----LGLLWRLSPPSSDPKVHQAVSDMSFCPSNGD 306
              .|..|....|.:|:|.|:      :||     |..||:.   .:|.....||:.:.:.|...|
Mouse   286 IVERMVNQNTYDDVAQDFKYYEDTADEYRDQEGTLLPLWKF---QNDKAKRLAVTALCWNPKYKD 347

  Fly   307 IMAVAYGVYSHGKVSKLPRSGWVYVWNIKNPVNPERRYHYQVPVVTVEFSPTQPQLLAIGLHNGG 371
            :.||.:|.|...|.|:    |.:.::::|||..||..:..:..::.::.....|.|:.:|.::|.
Mouse   348 LFAVGHGSYDFMKQSR----GMLLLYSMKNPSFPEYMFSSESGIMCLDVHVDHPYLVVVGYYDGN 408

  Fly   372 VEVRDISGQDLPPLAVSQRLSSPYFEPVTAIKWIYFEGDVGCRNPHITPFLATSQAGAVTKYRLI 436
            |.:.::......|...|...|..:.:||..:||...:.|      |...|.:.|..|.:..:.|:
Mouse   409 VAIYNLKKPHSQPCFRSTSKSGKHTDPVWQVKWQKDDMD------HNLNFFSVSSDGRIVSWTLV 467

  Fly   437 NSPNMLGLEQQRLQRAEGELEGIP--IERQPPAASLLANRHPQCLEIVLDPVQSDIYYVLTDEGT 499
            .| .::.::..:| :.||....||  ::..........:.|.:.         ..::.|.|:||.
Mouse   468 KS-ELVHIDIIKL-KTEGSTTEIPEGLQLHTVGCGTAFDFHKEI---------DYMFLVGTEEGK 521

  Fly   500 LYKCSTNYPLQHLELRQVHDGPAACMEFSPWSPRMYLTCGSDWCIRIWLAGILLPIVTLQHHLSP 564
            :||||.:|..|.|:....|:.....:.::|:..:::::|.|||.::||...|..|:.....: |.
Mouse   522 IYKCSKSYSSQFLDTYDAHNMAVDAVLWNPYHTKVFMSCSSDWTVKIWDHTIKTPMFIYDLN-SA 585

  Fly   565 VHCARWSRTHSTILVSLSRSTVD----IWDLRNSTMKPVSSTVIDA----DIFYTTFKFTHCGRS 621
            |....|:...||:..::   |.|    ::||..:..:.:.:..:.|    .|.:..|...|  ..
Mouse   586 VGDVAWAPYSSTVFAAV---TTDGKAHVFDLAVNKYEAICNQPVVAKKKNKITHVQFNPIH--PI 645

  Fly   622 LAVGNEAGNLLMLSFEDMPFPPHFQYKQLKRAIFKALSMQPDLRKQVK 669
            :.||::.|:::                        .|.:.|:|||..|
Mouse   646 IIVGDDRGHII------------------------CLKLSPNLRKMPK 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13930NP_647645.1 WD40 repeat 295..344 CDD:293791 15/48 (31%)
WD40 repeat 350..397 CDD:293791 8/46 (17%)
WD40 repeat 400..473 CDD:293791 14/74 (19%)
WD40 442..>629 CDD:441893 42/196 (21%)
WD40 repeat 478..513 CDD:293791 10/34 (29%)
WD40 <518..>593 CDD:475233 19/78 (24%)
WD40 repeat 524..560 CDD:293791 9/35 (26%)
Dnai1NP_780347.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 119..165 9/66 (14%)
WD40 repeat 336..382 CDD:293791 15/49 (31%)
WD40 <354..612 CDD:475233 63/282 (22%)
WD 1 382..422 5/39 (13%)
WD40 repeat 388..429 CDD:293791 7/40 (18%)
WD 2 431..474 11/49 (22%)
WD40 repeat 436..493 CDD:293791 15/64 (23%)
WD40 repeat 501..538 CDD:293791 12/45 (27%)
WD 3 539..579 10/39 (26%)
WD40 repeat 544..581 CDD:293791 9/36 (25%)
WD 4 581..621 9/43 (21%)
WD40 repeat 586..627 CDD:293791 8/43 (19%)
WD 5 629..668 11/64 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.