DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13930 and dnai1.2

DIOPT Version :9

Sequence 1:NP_647645.1 Gene:CG13930 / 38210 FlyBaseID:FBgn0035256 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_001074027.1 Gene:dnai1.2 / 555705 ZFINID:ZDB-GENE-070112-1302 Length:660 Species:Danio rerio


Alignment Length:662 Identity:138/662 - (20%)
Similarity:250/662 - (37%) Gaps:150/662 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 QLDTPMSPTLEEPNYLKEPASSARSAHSARPPATPF--------IKVLLRKTPIVVLFERRSMTA 124
            |||.    |.||   |||..:...:|::...|....        .|.::....:.:.||......
Zfish    63 QLDL----TEEE---LKEEITRVLTANNPNAPQNVVRYSFKEGCYKTIVFVDQMAIHFELEGNLV 120

  Fly   125 LADTEEGRQVMEDNRKY-----DELLS------GTDKTRRT-----VDADTQTMTALMKSRLVNT 173
            ..:::|||::|..:.:.     ||.|.      |..:.:.|     :|..:||:..|.:.....|
Zfish   121 HKESDEGRRLMAKHTEREDCGGDERLENVPIKPGKREQKVTNQFNFIDRASQTLNNLPREISCQT 185

  Fly   174 ERLTTAQMGSYVSNFEMYDTYTD----LEKSTTSVQVQ--------GAKKMEITTYHVGGVDQFV 226
            |....|...:..:.:|:||.|.:    .|||....:.|        ..|||.........:.|..
Zfish   186 EPPPRANFSATANQWEIYDFYVEELQRREKSKEKQESQFPNKEEDRSKKKMIQAEAQSDDISQLA 250

  Fly   227 GINCLPGFRLALMLTMRILASNVFEPQQRRYRNMAPPDPLAEDVKF-----------KYRLGLLW 280
                     ....:..|::..|:|             |.:|:|..:           |..|..||
Zfish   251 ---------KPAEIIERMVNQNIF-------------DEVAQDFMYFEDAADEFRGEKGTLLPLW 293

  Fly   281 RLSPPSSDPKVHQAVSDMSFCPSN--GDIMAVAYGVYSHGKVSKLPRSGWVYVWNIKNPVNPERR 343
            :.....:     :.:|..:.|.::  .|:.||..|.|...:..:    |.:..:.:|||..||..
Zfish   294 KFQYDKA-----KGLSVTALCWNHIYSDLFAVGLGSYEFTQQER----GMLLFYTLKNPSFPEFI 349

  Fly   344 YHYQVPVVTVEFSPTQPQLLAIGLHNGGVEVRDISGQDLPPLAVSQRLSSPYFEPVTAIKWIYFE 408
            ::....|:.|:.......|:|:||::|.|.|.|:..:...|:..|...|..:...|..:||...:
Zfish   350 FNTDSGVMCVDIHEQLSYLVAVGLYDGCVSVYDLRKKSDQPMYNSIASSGKHTGAVWQVKWQKDD 414

  Fly   409 GDVGCRNPHITPFLATSQAGAVTKYRLINSPNMLGLEQQRLQRAEGELEGIPIERQPPAASLLAN 473
            .|    :.|  .|.:.|..|.|..:.|:                :.|:....|.:.||     .:
Zfish   415 LD----SNH--NFFSVSTDGRVVSWTLV----------------KHEIVFTDIIKLPP-----VD 452

  Fly   474 RHPQCLEIVLDPV--------QSDIYYVL-TDEGTLYKCSTNYPLQHLELRQVHDGPAACMEFSP 529
            :.|..|:.|:...        |.|.:::: |:.|.::|.|..|..:.||:...|....:|:.::|
Zfish   453 KVPDDLKNVVATAGTSLDFHKQKDHHFLVGTEAGKIHKGSKYYSSKFLEMYDAHFMTVSCVRWNP 517

  Fly   530 WSPRMYLTCGSDWCIRIWLAGILLPIVTLQHHLSPVHCARWSRTHSTILVSLSR-STVDIWDLR- 592
            :.|.::::||.||.::||...|..|:.|.:...|....| ||...||:..:::. ..|.::||. 
Zfish   518 FHPNVFISCGWDWMVKIWDHTINSPVFTFELKSSVTDVA-WSPHSSTVFAAVTADGKVHVFDLSI 581

  Fly   593 NSTMKPVSSTVIDADIFYTTFKFTHCGRSLAVGNEAGNLLMLSFEDMPFPPHFQYKQLKRAIFKA 657
            |.........|:.........:|......:.||::.|.::                        :
Zfish   582 NKYEALCQQKVVSKKTRLLHIEFNPVHPIIIVGDDRGRVI------------------------S 622

  Fly   658 LSMQPDLRKQVK 669
            |.:.|:|||:.|
Zfish   623 LKLSPNLRKKPK 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13930NP_647645.1 WD40 <279..648 CDD:225201 82/381 (22%)
WD40 repeat 295..344 CDD:293791 13/50 (26%)
WD40 repeat 350..397 CDD:293791 13/46 (28%)
WD40 repeat 400..473 CDD:293791 13/72 (18%)
WD40 repeat 478..513 CDD:293791 9/43 (21%)
WD40 <518..>593 CDD:295369 22/76 (29%)
WD40 repeat 524..560 CDD:293791 12/35 (34%)
dnai1.2NP_001074027.1 WD40 <296..650 CDD:225201 86/400 (22%)
WD40 354..620 CDD:295369 67/293 (23%)
WD40 repeat 357..397 CDD:293791 11/39 (28%)
WD40 repeat 405..485 CDD:293791 20/106 (19%)
WD40 repeat 511..547 CDD:293791 12/35 (34%)
WD40 repeat 552..591 CDD:293791 9/39 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D310818at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.