DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13930 and Dnai1

DIOPT Version :9

Sequence 1:NP_647645.1 Gene:CG13930 / 38210 FlyBaseID:FBgn0035256 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_001019513.1 Gene:Dnai1 / 500442 RGDID:1565671 Length:705 Species:Rattus norvegicus


Alignment Length:720 Identity:138/720 - (19%)
Similarity:259/720 - (35%) Gaps:222/720 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 ARSAHSARPP----------ATPFIKVLLRKTP------IVVLFERRSMTALA------------ 126
            |:|..:.|||          ...|.::|....|      :...|:.|:...:.            
  Rat    36 AQSKAAVRPPDQLELTDAELKEEFTRILTANNPHAPQNIVRYSFKERTYKLIGFVNQMAIHFSQV 100

  Fly   127 ------DTEEGRQVMEDNRKY-DELLSGTDKTRRTVDADT------------------------- 159
                  |::|||:     :.| |||::|:.::.:.|.:||                         
  Rat   101 GNLIPKDSDEGRR-----QHYRDELVAGSQESVKVVTSDTEILEEEEEPKEGEGEGEGEAEGEAE 160

  Fly   160 --------------------------------------------QTMTALMKSRLVNTERLTTAQ 180
                                                        ||....::.|....|......
  Rat   161 AGSQTDVPAAAETTEKVIEEELMAPVQPKERKLTNQFNFSERASQTFNNPLRDRECQMEPPPRTN 225

  Fly   181 MGSYVSNFEMYDTYTD--------LEKSTTSVQVQGAKKMEITTYHVGGVDQFVGINCLPGFRLA 237
            ..:..:.:|:||.|.|        .||..|...|  |||.|                     ::|
  Rat   226 FSATANQWEIYDAYVDELEKLEKTKEKEKTKTPV--AKKTE---------------------KMA 267

  Fly   238 L--MLTMRILASNVFEPQQ-----RRYRNMAPPDPLAEDVKF------KYR-----LGLLWRLSP 284
            :  :.:|...:.::.:..|     .|..|....|.:|:|.|:      :||     |..||:.  
  Rat   268 MRKLTSMESQSDDITKVTQAAKIVERMVNQNTYDDVAQDFKYYEDAADEYRDQEGTLLPLWKF-- 330

  Fly   285 PSSDPKVHQAVSDMSFCPSNGDIMAVAYGVYSHGKVSKLPRSGWVYVWNIKNPVNPERRYHYQVP 349
             .:|.....||:.:.:.|...|:.||.:|.|...|.|:    |.:.::::|||..||..:..:..
  Rat   331 -QNDKAKRLAVTALCWNPKYKDLFAVGHGSYDFMKQSR----GMLLLYSMKNPSFPEYMFSSESG 390

  Fly   350 VVTVEFSPTQPQLLAIGLHNGGVEVRDISGQDLPPLAVSQRLSSPYFEPVTAIKWIYFEGDVGCR 414
            ::.::.....|.|:.:|.::|.|.:.::......|...|...|..:.:||..:||...:.|    
  Rat   391 IMCLDMHMDHPYLVVVGYYDGNVAIYNLKKPHSQPCFRSTSKSGKHTDPVWQVKWQKDDMD---- 451

  Fly   415 NPHITPFLATSQAGAVTKYRLINSPNMLGLEQQRLQRAEGELEGIP--IERQPPAASLLANRHPQ 477
              |...|.:.|..|.:..:.|:.| .::.::..:| :.||....||  ::..........:.|.:
  Rat   452 --HNLNFFSVSSDGRIVSWTLVKS-ELVHIDVIKL-KDEGSTTEIPEGLQLHTVGCGTAFDFHKE 512

  Fly   478 CLEIVLDPVQSDIYYVLTDEGTLYKCSTNYPLQHLELRQVHDGPAACMEFSPWSPRMYLTCGSDW 542
            .         ..::.|.|:||.:||||.:|..|.|:....|:.....:.::|:..|::::|.|||
  Rat   513 I---------DYLFLVGTEEGKIYKCSKSYSSQFLDTYDAHNMAVDAVLWNPYHARVFISCSSDW 568

  Fly   543 CIRIWLAGILLPIVTLQHHLSPVHCARWSRTHSTILVSLSRSTVD----IWDLRNSTMKPVSSTV 603
            .::||...|..|:.....: :.|....|:...||:..::   |.|    ::||..:..:.:.:..
  Rat   569 TVKIWDHAIKTPMFIYDLN-AAVGDVAWAPYSSTVFAAV---TTDGKAHVFDLAVNKYEAICNQP 629

  Fly   604 IDA----DIFYTTFKFTHCGRSLAVGNEAGNLLMLSFEDMPFPPHFQYKQLKRAIFKALSMQPDL 664
            :.|    .|.:..|...|  ..:.||::.|::                        ..|.:.|:|
  Rat   630 VVAKKKNKITHVQFNPIH--PIIIVGDDRGHI------------------------TCLKLSPNL 668

  Fly   665 RKQVK 669
            ||..|
  Rat   669 RKMPK 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13930NP_647645.1 WD40 <279..648 CDD:225201 81/378 (21%)
WD40 repeat 295..344 CDD:293791 15/48 (31%)
WD40 repeat 350..397 CDD:293791 8/46 (17%)
WD40 repeat 400..473 CDD:293791 14/74 (19%)
WD40 repeat 478..513 CDD:293791 10/34 (29%)
WD40 <518..>593 CDD:295369 19/78 (24%)
WD40 repeat 524..560 CDD:293791 10/35 (29%)
Dnai1NP_001019513.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44 2/7 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..169 4/46 (9%)
WD40 325..683 CDD:225201 87/403 (22%)
WD40 repeat 340..386 CDD:293791 15/49 (31%)
WD40 <358..616 CDD:295369 63/282 (22%)
WD 1 386..426 5/39 (13%)
WD40 repeat 392..433 CDD:293791 7/40 (18%)
WD 2 435..478 11/49 (22%)
WD40 repeat 440..494 CDD:293791 14/61 (23%)
WD40 repeat 505..542 CDD:293791 12/45 (27%)
WD 3 543..583 11/39 (28%)
WD40 repeat 548..587 CDD:293791 10/38 (26%)
WD 4 585..625 8/43 (19%)
WD40 repeat 590..631 CDD:293791 8/43 (19%)
WD 5 633..672 11/64 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D310818at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9130
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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