DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13930 and DYNC1I2

DIOPT Version :9

Sequence 1:NP_647645.1 Gene:CG13930 / 38210 FlyBaseID:FBgn0035256 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_001258714.1 Gene:DYNC1I2 / 1781 HGNCID:2964 Length:638 Species:Homo sapiens


Alignment Length:718 Identity:131/718 - (18%)
Similarity:259/718 - (36%) Gaps:155/718 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RKDYRTADFEQLSRMIRDHPLMKE---------PGAEQQQLHKLRTPEYRTKCVMRASLDDIAL- 60
            ||..|.|...:..:...:....||         |..|:..|.|.|..       ..|.|..:.| 
Human    13 RKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRRE-------AEALLQSMGLT 70

  Fly    61 ---GINLYKLQLDTPMSPTLEEPNYLKEPAS--------SARSAHSARPPAT------------P 102
               .|...:..:..||||:.:..:...|..|        .:|:.|....|:.            |
Human    71 PESPIVFSEYWVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDPSVLQLHSDSDLGRGP 135

  Fly   103 FIKVLLRKTPIVVLFERRSMTALADTEEG--RQVMEDNRKYDELLSG----TDKTRRTVDADTQT 161
             ||:.:.|...|....|..:|...:|:..  .|..||..:.|::::.    ..:..:|:..|.:.
Human   136 -IKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIEPEEEKTLKKDEEN 199

  Fly   162 MTALMKSRLVNTERLTTAQMGSYVSNFEMYDTYTDLEKSTTSVQVQGAKKMEITTYHVGGVDQFV 226
            .:......|...|:........::|   .:|..|.:.:...|.|:                    
Human   200 DSKAPPHELTEEEKQQILHSEEFLS---FFDHSTRIVERALSEQI-------------------- 241

  Fly   227 GINCLPGFRLALMLTMRILASNVFEPQQRRYRNMAPPDPLAEDVKFKYRLGLLWRLSPPSSDPK- 290
                                 |:|.....|.         .||.:.:.:.|....|:....|.: 
Human   242 ---------------------NIFFDYSGRD---------LEDKEGEIQAGAKLSLNRQFFDERW 276

  Fly   291 -VHQAVSDMSFCPSNGDIMAVAYGVYSHGKVSKLPRSGWVYVWNIK-NPVNPERRYHYQVPVVTV 353
             .|:.||.:.:.....:::..:   |::.:.:.....|...|||:| ....||..:|.|..|::.
Human   277 SKHRVVSCLDWSSQYPELLVAS---YNNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSA 338

  Fly   354 EFSPTQPQLLAIGLHNGGVEVRDISGQDLPPLAVSQRLSSPYFEPVTAIKWIYFEGDVGCRNPHI 418
            .|:...|.|:..|.::|.:.:.|.......|:..:...::.:..||      |....||.:|.| 
Human   339 TFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPV------YCVNVVGTQNAH- 396

  Fly   419 TPFLATSQAGAVTKYRLINSPNMLGLEQQRLQRAEGELEGIPIERQPPAASLLANRHPQCLEIVL 483
             ..::.|..|.:..:.|    :||...|..::.         :.:|..|.::.:...|       
Human   397 -NLISISTDGKICSWSL----DMLSHPQDSMEL---------VHKQSKAVAVTSMSFP------- 440

  Fly   484 DPVQSDI--YYVLTDEGTLY-KCSTNYPLQHLELRQVHDGP---------AACMEFSPWSPRMYL 536
               ..|:  :.|.::||::| .|.........|:.:.|.||         ...::||    .:::
Human   441 ---VGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFS----HLFV 498

  Fly   537 TCGSDWCIRIWLAGILLPIVTLQHHLSPVHCARWSRTHSTILVSL-SRSTVDIWDLRNSTMKPVS 600
            |...||.:::|......|:.:.:.:...|:...||.||..:...: ....:|:|:|.|.|..|.:
Human   499 TSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTA 563

  Fly   601 STVIDADIFYTTFKFTHCGRSLAVGNEAGNLLMLSF-EDMPFPPHFQYKQLKRAIFKALSMQPDL 664
            |..::.:......::||.||.:|||:..|.:::... |.:..|.:.::.:..|.:.:..:.:.|.
Human   564 SISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRADA 628

  Fly   665 RKQ 667
            .::
Human   629 EEE 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13930NP_647645.1 WD40 <279..648 CDD:225201 78/385 (20%)
WD40 repeat 295..344 CDD:293791 10/49 (20%)
WD40 repeat 350..397 CDD:293791 8/46 (17%)
WD40 repeat 400..473 CDD:293791 13/72 (18%)
WD40 repeat 478..513 CDD:293791 6/37 (16%)
WD40 <518..>593 CDD:295369 18/84 (21%)
WD40 repeat 524..560 CDD:293791 7/35 (20%)
DYNC1I2NP_001258714.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..135 24/128 (19%)
Dynein_IC2 135..163 CDD:402922 8/28 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..214 10/58 (17%)
WD 1 277..326 9/51 (18%)
WD40 repeat 282..331 CDD:293791 10/51 (20%)
WD40 329..>599 CDD:225201 63/304 (21%)
WD 2 330..370 9/39 (23%)
WD40 repeat 339..377 CDD:293791 7/37 (19%)
WD 3 379..420 12/52 (23%)
WD40 repeat 385..426 CDD:293791 11/55 (20%)
WD 4 429..469 8/49 (16%)
WD40 repeat 434..481 CDD:293791 11/56 (20%)
WD 5 474..519 10/48 (21%)
WD40 repeat 489..521 CDD:293791 7/35 (20%)
WD 6 522..562 10/39 (26%)
WD40 repeat 527..565 CDD:293791 11/37 (30%)
WD 7 568..607 9/38 (24%)
WD40 repeat 573..599 CDD:293791 8/25 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54336
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.