DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13930 and LOC1279985

DIOPT Version :10

Sequence 1:NP_647645.1 Gene:CG13930 / 38210 FlyBaseID:FBgn0035256 Length:685 Species:Drosophila melanogaster
Sequence 2:XP_319777.5 Gene:LOC1279985 / 1279985 VectorBaseID:AGAMI1_006308 Length:745 Species:Anopheles gambiae


Alignment Length:481 Identity:85/481 - (17%)
Similarity:143/481 - (29%) Gaps:167/481 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 VYVWNIKNPVNPERRYHYQVPVVTVEFSPTQPQLLAIGLHNGGVEVRDISGQ------------- 380
            |.:|:.::.:.|.........|..|.|.|...:||..||.||.:.:.|:.|:             
Mosquito    63 VLLWSFEDSLEPALELKTIREVTAVAFCPYDGELLVGGLANGQIVLWDLGGELERVEQANRDARG 127

  Fly   381 ------------DLP----------PLAVSQRLSSPYFEPVTAIKWI---YF------------- 407
                        |.|          |.|||. |.......:|.:||:   |:             
Mosquito   128 ASEYRKQARHLMDYPAVERIDREVNPAAVSS-LEHSSRAAITCVKWLPRNYYCTSTGHLKSHADK 191

  Fly   408 ----------EG-----DVGCRNPHITPFLA---TSQAGAVTKYRLINS---------------- 438
                      :|     |:....|.:...:|   |:|....|.|:.:|:                
Mosquito   192 LYRFMMTTALDGSVCFWDLEFTMPALQKLIAASKTAQQADRTMYQRVNNLFFPTFKLVCELPILS 256

  Fly   439 ----------------------------PNMLGLE------QQRLQRAEGELEGIPIERQPPAAS 469
                                        |..:|.|      ....|..||..||...|:     .
Mosquito   257 VVIDEAVYLSMPLETVTELTVRVKHQQQPVPVGCEMLLKVGSYTGQLIEGSWEGYDFEQ-----G 316

  Fly   470 LLANRHPQCLEIVLDPVQSDIYYVLTDEGTLYKCSTNYPLQHLELRQVHDGPAACMEFSPWSPRM 534
            .|.|..|                              ..:||: ..|:|:||...:|.:|....:
Mosquito   317 ALVNDEP------------------------------VKVQHV-FGQIHNGPVLALERNPHCRSV 350

  Fly   535 YLTCGSDWCIRIWLAGILLPIVTLQHHLSPVHCARWSRTH-STILVSLSRSTVDIWDLRNSTMKP 598
            :|:.|.: .:.||........|..:.....:...|||... |...:.||....:|||:...|.:.
Mosquito   351 FLSIGGN-VLAIWAEDDKSSPVFWRKKAEMITACRWSLDRVSVFFIGLSNGDFEIWDMSLKTFRA 414

  Fly   599 VSSTVIDADIFYT--TFKFTHCGRSLAVGNEAGNLLMLSFEDM---PFPPHFQYKQLKRAIFKAL 658
            .....:.::...|  ..:.......|||.:...|:.:......   |.|.  :.:..:|.:...|
Mosquito   415 TVCLNLGSEALTTISQHRLASARNCLAVADHNANIRIFKLAPTFVNPLPD--EVETFQRMMNHEL 477

  Fly   659 SMQPDLRKQVKSVGYFGYPGGTKQTR 684
            :.:.:....||  ||:...|.|.:.:
Mosquito   478 TRKTNQATWVK--GYYDRNGATIEAK 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13930NP_647645.1 WD40 repeat 295..344 CDD:293791 3/14 (21%)
WD40 repeat 350..397 CDD:293791 19/81 (23%)
WD40 repeat 400..473 CDD:293791 23/156 (15%)
WD40 442..>629 CDD:441893 38/195 (19%)
WD40 repeat 478..513 CDD:293791 2/34 (6%)
WD40 <518..>593 CDD:475233 19/75 (25%)
WD40 repeat 524..560 CDD:293791 7/35 (20%)
LOC1279985XP_319777.5 None

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