DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13930 and dnai2b

DIOPT Version :9

Sequence 1:NP_647645.1 Gene:CG13930 / 38210 FlyBaseID:FBgn0035256 Length:685 Species:Drosophila melanogaster
Sequence 2:XP_005156459.1 Gene:dnai2b / 101884977 ZFINID:ZDB-GENE-131016-1 Length:604 Species:Danio rerio


Alignment Length:546 Identity:114/546 - (20%)
Similarity:204/546 - (37%) Gaps:116/546 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 MKSRLVNTERLTTAQMGSYVSNFEMYDTYTDLEKSTTSVQVQGAKKMEITTYHVGGVDQFVGI-- 228
            |....|||||..:...|  :::.| .....||........::..||:|...::...:.|..|:  
Zfish    57 MSEHEVNTERFESESRG--INHVE-GGWPKDLNPDDMEATIRYRKKVEKDEHYQNTIMQIAGLME 118

  Fly   229 NCLPGFRLALMLTMRILASNVFEPQQRRYRNMAPPDPLAEDVKFKYRLGLLWRLSPPSS------ 287
            :|:          .:..|::::|....        |...|||:...        ..||:      
Zfish   119 HCI----------RQNNATDIYEDFLE--------DEDEEDVEESE--------EQPSAKTINVF 157

  Fly   288 -DP-KVHQAVSDMSFCPSNGDIMAVAYGVYSHGKVSKLPR--SGWVYVWNIKNPVNPERRYHYQV 348
             || :|.:..:.:|:.|.....:|||   ||..:..:.|.  :...|:|:|:||..||.......
Zfish   158 RDPNEVKRTATSLSWHPDGNHKLAVA---YSSLEFQRAPNDMNFDSYIWDIENPNKPEMTLKPVC 219

  Fly   349 PVVTVEFSPTQPQLLAIGLHNGGVEVRDISGQDLP----PLAVSQRLSSPYFEPVTAIKWIYFEG 409
            |:|.:|::|....:|..|.:||.:...|......|    |:..|.|      :||  .|.|:.:.
Zfish   220 PLVCLEYNPKDSHILIGGSYNGQIAYWDTRKGSQPVEMSPIEFSHR------DPV--YKAIWLQS 276

  Fly   410 DVGCRNPHITPFLATSQAGAVTKY----------RLINSPNMLGLEQQRLQRAEGELEGIPIERQ 464
            ..|      |...:.|..|.|..:          ||:..|...|       ..:..|..|.:|  
Zfish   277 KTG------TDIFSASTDGQVLWWDIRKMSEPTERLVMDPTKKG-------NIDNSLGAISLE-- 326

  Fly   465 PPAASLLANRHPQCLEIVLDPVQSDIYYVLTDEGTLYKCS--TNYPLQHLELR-QVHDGPAACME 526
                              .:......:.|.|::|.:..|:  ...|.:.:... ..|.||...::
Zfish   327 ------------------FETTMPTKFMVGTEQGLVVSCNRKAKTPAEKIVCTYSGHHGPVYALQ 373

  Fly   527 FSPWSPRMYLTCGSDWCIRIWLAGIL-LPIVTLQHHLSPVHCARWSRTHSTILVSLSR-STVDIW 589
            .:|:.|:.:||.| ||..|||...|. ..|:..::|::.:....||....::..::.. .|:|:|
Zfish   374 RNPFFPKNFLTVG-DWTARIWSEDIKESSIMWTKYHIAHLLDGCWSPVRPSVFFTVKMDGTLDVW 437

  Fly   590 DLRNSTMKPVSSTVIDADIFYTTFKFTHCGRSLAVGNEAGNLLMLSF----------EDMPFPPH 644
            |:......|.....:..:..| :.|....||.||.|::.|...:|..          |.......
Zfish   438 DILFKQNDPTLCLKVCDEALY-SIKVQDNGRFLACGSQLGTTTLLEISSGLCSLQKNEKALVSEM 501

  Fly   645 FQYKQLKRAIFKALSMQPDLRKQVKS 670
            |:.:..:..|.:|...:..|:::.:|
Zfish   502 FERETKREKILEARHREMRLKERSRS 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13930NP_647645.1 WD40 <279..648 CDD:225201 88/407 (22%)
WD40 repeat 295..344 CDD:293791 15/50 (30%)
WD40 repeat 350..397 CDD:293791 12/50 (24%)
WD40 repeat 400..473 CDD:293791 14/82 (17%)
WD40 repeat 478..513 CDD:293791 5/36 (14%)
WD40 <518..>593 CDD:295369 22/76 (29%)
WD40 repeat 524..560 CDD:293791 12/36 (33%)
dnai2bXP_005156459.1 WD40 <168..495 CDD:225201 81/372 (22%)
WD40 repeat 169..215 CDD:293791 15/48 (31%)
WD40 repeat 221..260 CDD:293791 9/38 (24%)
WD40 223..477 CDD:295369 62/296 (21%)
WD40 repeat 268..296 CDD:293791 8/35 (23%)
WD40 repeat 318..354 CDD:293791 7/55 (13%)
WD40 repeat 369..409 CDD:293791 12/40 (30%)
GBP_C <489..588 CDD:303769 6/39 (15%)
coiled coil 567..578 CDD:293879
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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