DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX5 and rab36

DIOPT Version :10

Sequence 1:NP_647644.2 Gene:RabX5 / 38209 FlyBaseID:FBgn0035255 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_001073128.1 Gene:rab36 / 780839 ZFINID:ZDB-GENE-040910-5 Length:262 Species:Danio rerio


Alignment Length:209 Identity:103/209 - (49%)
Similarity:138/209 - (66%) Gaps:12/209 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 KFRPCKVIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGVDFELENFSILGHNYSLEMWDTAGQER 125
            :|:..|.:.|||.:||||.::||||.|.|:.:||||||||||:|.|.:.|..:||::|||||||:
Zfish    52 RFKMSKAVVVGDLNVGKTCLINRFCKDVFERDYKATIGVDFEIERFEMSGLPFSLQIWDTAGQEK 116

  Fly   126 FRCIAGAYYRNASVIVVTYDMSKKDSLESAKKWLNSALNYNASKRPLVFLVGTKADLLSKEEFVR 190
            |:|||.||||.|.||:..:||:...:||:.|:||..|:..|......|||||||.||||.||..|
Zfish   117 FKCIASAYYRGAQVIITVFDMADIKTLENTKQWLLEAVRENEPDSCFVFLVGTKRDLLSTEECQR 181

  Fly   191 MERLAGLAAAELQAEYWSVSARSGFKVTELFQRIAALAFEEAVMQEIR------------SIKNK 243
            .||.|...|||:.||:||||:::|..|.|.|.|:||||||:|||:::.            ||.|.
Zfish   182 TERDAVKIAAEMNAEFWSVSSKTGENVQEFFFRVAALAFEDAVMKDLESGTTSSTQIGDGSILND 246

  Fly   244 PQEQATQASVKSQT 257
            ...:.||...|.::
Zfish   247 KTLEVTQEKPKKKS 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX5NP_647644.2 P-loop containing Nucleoside Triphosphate Hydrolases 66..230 CDD:476819 91/163 (56%)
rab36NP_001073128.1 P-loop containing Nucleoside Triphosphate Hydrolases 56..221 CDD:476819 91/164 (55%)

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