DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX5 and rab34a

DIOPT Version :9

Sequence 1:NP_647644.2 Gene:RabX5 / 38209 FlyBaseID:FBgn0035255 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_001006094.1 Gene:rab34a / 450074 ZFINID:ZDB-GENE-041010-197 Length:260 Species:Danio rerio


Alignment Length:250 Identity:101/250 - (40%)
Similarity:151/250 - (60%) Gaps:9/250 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LPPAYSAAQTPLSKERDFGAQVRYYLEAPRK---PKFRPCKVIFVGDCSVGKTAIVNRFCYDKFQ 90
            ||..::.. ..|:.|.:|.::|:...:..|.   .:|:..|||.|||.:||||.::||||.|.|.
Zfish    16 LPKCFNRG-AALNTENEFHSKVKTACQQQRTGTVGRFKISKVIVVGDLAVGKTCLINRFCKDVFD 79

  Fly    91 SNYKATIGVDFELENFSILGHNYSLEMWDTAGQERFRCIAGAYYRNASVIVVTYDMSKKDSLESA 155
            .|||||||||||:|.|.:||..:||::|||||||||:|||..|||.|..:::.:|::...|||..
Zfish    80 KNYKATIGVDFEMERFEVLGVPFSLQLWDTAGQERFKCIASTYYRGAQAVIIVFDLTDVASLEHT 144

  Fly   156 KKWLNSALNYNASKRPLVFLVGTKADLLSKEEFVRMERLAGLAAAELQAEYWSVSARSGFKVTEL 220
            ::||..|:..|.....|:||||||.||.|..::..:|:.|...|.:::||||::||.||..|.:.
Zfish   145 RQWLEDAMKENDPTSVLLFLVGTKKDLSSPAQYSLIEQDAIKIADQMKAEYWALSALSGENVRDF 209

  Fly   221 FQRIAALAFEEAVMQEIRSIKNKPQEQATQASVKSQTFDLRNFFGSRLSQQKSGC 275
            |.|:|:|.||..|:.|:....::...:..|.|..|     .|.:.:...:|.:.|
Zfish   210 FFRVASLTFEANVLAELEKSGSRRIGEVVQISSNS-----NNLYATSKKKQSNCC 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX5NP_647644.2 P-loop_NTPase 66..230 CDD:304359 83/163 (51%)
RAB 66..225 CDD:197555 81/158 (51%)
rab34aNP_001006094.1 Rab36_Rab34 54..221 CDD:206693 85/166 (51%)
RAB 55..214 CDD:197555 81/158 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 181 1.000 Domainoid score I3418
eggNOG 1 0.900 - - E1_KOG0094
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 201 1.000 Inparanoid score I3733
OMA 1 1.010 - - QHG48903
OrthoDB 1 1.010 - - D1048146at2759
OrthoFinder 1 1.000 - - FOG0003705
OrthoInspector 1 1.000 - - otm24699
orthoMCL 1 0.900 - - OOG6_106322
Panther 1 1.100 - - LDO PTHR47977
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2570
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.840

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