DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX5 and RAB41

DIOPT Version :9

Sequence 1:NP_647644.2 Gene:RabX5 / 38209 FlyBaseID:FBgn0035255 Length:277 Species:Drosophila melanogaster
Sequence 2:XP_011529250.1 Gene:RAB41 / 347517 HGNCID:18293 Length:239 Species:Homo sapiens


Alignment Length:176 Identity:58/176 - (32%)
Similarity:104/176 - (59%) Gaps:6/176 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LEAPRKPKFRP-C--KVIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGVDFELENFSILGHNYSL 115
            |||..:.:::. |  |::|:|:.|||||:|::||.|:.|....:||:|:||..:...:......|
Human    18 LEAAERTEYQSLCKSKLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQL 82

  Fly   116 EMWDTAGQERFRCIAGAYYRNASVIVVTYDMSKKDSLESAKKWLNSALNYNASKRPLVFLVGTKA 180
            ::|||||||||..:..:|.|::::.||.||::..:|.:...||:.. :........::.|:|.|.
Human    83 QLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEH-VRAERGDDVVIMLLGNKI 146

  Fly   181 DLLSKEEFVRMERLAGLAAAELQAEYWSVSARSGFKVTELFQRIAA 226
            ||.:|.: |..|: ....:..|...:...||::|:.|.:||:|:|:
Human   147 DLDNKRQ-VTAEQ-GEEKSRNLNVMFIETSAKTGYNVKKLFRRVAS 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX5NP_647644.2 P-loop_NTPase 66..230 CDD:304359 54/161 (34%)
RAB 66..225 CDD:197555 53/158 (34%)
RAB41XP_011529250.1 RAB 33..195 CDD:197555 54/161 (34%)
Rab6 33..192 CDD:206654 54/161 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0094
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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