DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL23A and RPL23AA

DIOPT Version :10

Sequence 1:NP_523886.1 Gene:RpL23A / 38208 FlyBaseID:FBgn0026372 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_181478.1 Gene:RPL23AA / 818531 AraportID:AT2G39460 Length:154 Species:Arabidopsis thaliana


Alignment Length:168 Identity:42/168 - (25%)
Similarity:54/168 - (32%) Gaps:54/168 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 DELTVEELKRKNP------RGVLISP-GPGTPQDSGISLQTVLELGPLVPLFGVCMGLQCIGE-- 119
            :.|..||....||      .|....| |.|.|              |..||.|..|......|  
plant  1056 EHLNPEETVCFNPPPPSFVEGTAPHPLGNGNP--------------PFPPLHGRLMPPPPESEFF 1106

  Fly   120 ---AFGGKIVRSPFGVMHGKSSMVHYDEKGEEGLFSGL-SNPFIVGRYHSLVIEKDTFPSDELEV 180
               ||....|.|..|...|:......||:.:||..:.| |.|.             ||..:|:| 
plant  1107 HPPAFPPLAVDSGSGRAEGEDDNEEEDEEEDEGSLAPLESQPI-------------TFTPEEME- 1157

  Fly   181 TAWTEDGLVMAARHRKYKHIQ------GVQFHPESIIT 212
               ....|..||:    :|||      .|:..|..::|
plant  1158 ---KYSKLQQAAQ----QHIQQQLLAKQVKNFPAGVVT 1188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL23ANP_523886.1 PTZ00191 132..277 CDD:185507 21/88 (24%)
RPL23AANP_181478.1 PTZ00191 38..154 CDD:185507
Blue background indicates that the domain is not in the aligned region.

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