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Protein Alignment RpL23A and RGD1562755
DIOPT Version :9
Sequence 1: | NP_001356972.1 |
Gene: | RpL23A / 38208 |
FlyBaseID: | FBgn0026372 |
Length: | 277 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038948495.1 |
Gene: | RGD1562755 / 289656 |
RGDID: | 1562755 |
Length: | 200 |
Species: | Rattus norvegicus |
Alignment Length: | 161 |
Identity: | 96/161 - (59%) |
Similarity: | 118/161 - (73%) |
Gaps: | 7/161 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 117 AKKGVKPVTKPAKGTAKAKAVALLNAKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKY 181
|.||.|....|.|..|:||| |.|||. ::||....:.:||.|:..||||.||:|...|||
Rat 2 APKGKKEAPSPPKAKAEAKA---LEAKKA---LLKGVHSRKKKKIITSPTFRRPKTLRLRSQPKY 60
Fly 182 PRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVN 246
||||...||::|.|.|||:|||||:||||||| :||||:..::|||:.::.||:|||||.|||||
Rat 61 PRKSASRRNKLDHYAIIKFPLTTESAMKKIED-STLVFIADVKANKHQIKQAVKKLYDIDVAKVN 124
Fly 247 VLIRPDGQKKAYVRLARDYDALDIANKIGII 277
.||:|||:||||||||.|||||.:|||||||
Rat 125 TLIQPDGEKKAYVRLAPDYDALYVANKIGII 155
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR11620 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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