Protein Alignment Srrm234 and rsr-2

DIOPT Version :10

• Sequence 1: NP_001097475.2
• Gene: Srrm234 / 38206
• FlyBaseID: FBgn0035253
• Length: 1655
• Species: Drosophila melanogaster
• Sequence 2: NP_001370093.1
• Gene: rsr-2 / 174862
• WormBaseID: WBGene00013260
• Length: 425
• Species: Caenorhabditis elegans
• Alignment Length: 766
• Identity: 158/766 - (20%)
• Similarity: 241/766 - (31%)
• Gaps: 361/766 - (47%)

  Fly     1 MYNGIGLTTPRGSGTNGHVQRNWACVRPGKKDKDYRAEDDTKKLDAQLNRPPNKEILDHDRKRKI 65
            |||||||.|.|||||||:||.|.:.:...::..:|..|||.:|::|:|||.||:||:||:|||:|
 Worm     1 MYNGIGLQTARGSGTNGYVQSNLSHLMQARRKIEYNGEDDLRKMEAELNRKPNEEIMDHNRKRQI 65

  Fly    66 EVKCLELEDILEKQGRTPEEIKSQVDSFRQKLMGQGKTDLAKDEFGRVANTTTSTATAAVRTTAT 130
            ||||.|.|.:||.:|...|:|:.:|..:|:.|:.|
 Worm    66 EVKCTEFEMLLEDKGLDDEDIERKVGEYRKNLLKQ------------------------------ 100

  Fly   131 ASAATASTMTTTTEATTVKVAKPKKRRKRRKRAGHAITTTTTEKSAAISTPGSKTSSPRTQTGEP 195
                                                                             
 Worm   101 ----------------------------------------------------------------- 100

  Fly   196 ASSAPSATSNGARKTKAPYFQHDNREYLAKYESFRLTAHTWNYAAVARKFKPLRPALASGANKTR 260
                                                                    |.||
 Worm   101 --------------------------------------------------------LESG----- 104

  Fly   261 RPAVSKRTHPDCACACQQKDPEPALEPAHRTAEHSIQKELPSSQMKINIDGSVLLELLKYSSSSL 325
                                                         ::|:|..:
 Worm   105 ---------------------------------------------ELNVDEEL------------ 112

  Fly   326 LGTLLGAGSAVATSARDTHQIAEAQQQKNARLREAFNISEYFVEGSSFDGDRKAKEDLAKSVALQ 390
                         |.:::|....|......::|.|..:.|.:|.|||.  .:..|.|:. ..|::
 Worm   113 -------------STKESHARRRAAANNRDKMRNALGLGEDYVPGSSM--AKMNKSDVV-GAAME 161

  Fly   391 KELDAQRESLAAAAAAAAAGKDKETGKRYALVRTPSRERDRDAGDAAANGDERDHVSKTDKKKRK 455
            .||.                                                    .|.||:|..
 Worm   162 SELP----------------------------------------------------QKDDKEKLL 174

  Fly   456 KRARESSASPERKKKKKSKKHKKESKSKKKRSRKRKHSESGRDSDRDSDEEDDSSEEERRESKNV 520
            :..|               .|:|        |:|::.|.|...|...|.|.....|:.|::.|..
 Worm   175 ETLR---------------LHRK--------SKKKQESSSSSSSSSSSSESSSEDEKHRKDRKKK 216

  Fly   521 RKKAK-KDKKKRDKKLKKKSRARASSSDSERTNSPSRKENKSDRSRGAKASKSDEKAPQQENVMR 584
            .||.| |:.:||.:||::|.|...:.||..:...|:...::.|       |:.|::.|:::   |
 Worm   217 EKKQKLKEMEKRREKLRQKERELLAVSDKVKKEEPAESSDEED-------SRKDQRKPRED---R 271

  Fly   585 SRSRERKDTRSSRPLEASIDSRQRKPRERSAATPPRKEPERHRERSKDRQRSKEKHRSRDRLRSR 649
            .||.||:|.|..|             |:|      |:.||..||    |:||.|....|.|...|
 Worm   272 RRSVERQDQREDR-------------RDR------RRSPEDPRE----RRRSPEDRTVRRRSPER 313

  Fly   650 ERQRSRERQRSRERQRSKERQRSKERQRSIERQRSKERQRSKERQRSRSKDALRCKEKPQCNEK- 713
            .||     |||...:|.|..||..||:|..:...::.|..:...::|| .|.|..|::|..:.:
 Worm   314 RRQ-----QRSPSVERRKSPQRRDERRRRHDSSENERRSTATASKKSR-MDELEVKQEPPSDSED 372

  Fly   714 ------------ERSRER----RRSKSKDRQRSKEKHRPKDEQQSVDKRRD 748
                        |:|.|:    |:|.|:....|.:.....|...|.|...|
 Worm   373 YIAKTNLAPIRVEKSAEKVEKSRKSSSESSSGSSDSDSSSDSSSSSDSSSD 423

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Srrm234	NP_001097475.2	cwf21_SRRM2-like	52..100	CDD:410600	24/47 (51%)
		PTZ00121	<560..1154	CDD:173412	56/206 (27%)
		U2AF_lg	747..>876	CDD:273727	1/2 (50%)
		SRRM_C	<1584..1612	CDD:464573
rsr-2	NP_001370093.1	cwf21_SRRM2-like	52..101	CDD:410600	25/199 (13%)