DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7970 and SYM1

DIOPT Version :10

Sequence 1:NP_001303378.1 Gene:CG7970 / 38205 FlyBaseID:FBgn0035252 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_013352.1 Gene:SYM1 / 850953 SGDID:S000004241 Length:197 Species:Saccharomyces cerevisiae


Alignment Length:197 Identity:40/197 - (20%)
Similarity:79/197 - (40%) Gaps:37/197 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LFGTYLEQLFNHPVRTKSITACVLATSANVTSQRLAGAKTLNQQSVFAYGLFGLIFGGSV----- 133
            |...|...|...|..|.:|....|....:|::|.|.....:|:...:......:|:|..:     
Yeast     3 LLHLYEASLKRRPKTTNAIMTGALFGIGDVSAQLLFPTSKVNKGYDYKRTARAVIYGSLIFSFIG 67

  Fly   134 ----------------PHYFYTTVERLFSQDVRFRRFFLFLSERLVYAPIYQALSLFF--LALFE 180
                            |.|.::.:....:.|            :|.:||:  .|..:|  :::.|
Yeast    68 DKWYKILNNKIYMRNRPQYHWSNMVLRVAVD------------QLAFAPL--GLPFYFTCMSIME 118

  Fly   181 GKSPSTALKNVEKLYWPLLKANWQYLSVFVYLNFAYVPPMFRSISMAIISFIWVVYIAQKRRRFQ 245
            |:|...|...:::.:||.|..||....:|..:||:.||...|.:::.:::..|..|::.|..:..
Yeast   119 GRSFDVAKLKIKEQWWPTLLTNWAVWPLFQAINFSVVPLQHRLLAVNVVAIFWNTYLSYKNSKVM 183

  Fly   246 DK 247
            :|
Yeast   184 EK 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7970NP_001303378.1 Mpv17_PMP22 177..238 CDD:461182 17/60 (28%)
SYM1NP_013352.1 Mpv17_PMP22 115..176 CDD:461182 17/60 (28%)

Return to query results.
Submit another query.