DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7970 and AT4G03410

DIOPT Version :10

Sequence 1:NP_001303378.1 Gene:CG7970 / 38205 FlyBaseID:FBgn0035252 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_974505.1 Gene:AT4G03410 / 827932 AraportID:AT4G03410 Length:361 Species:Arabidopsis thaliana


Alignment Length:227 Identity:46/227 - (20%)
Similarity:96/227 - (42%) Gaps:32/227 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GVSQAHLCTTGNMVLSK------------PLYSL--------FGTYLEQLFNHPVRTKSITACVL 97
            |::.|.:...|.:.::|            .||.:        :..|.:.|..:||..|...:.::
plant    86 GINAAIVLAAGTVAVTKLLTIDHDYWQGWTLYEILRYAPEHNWFAYEQILKTNPVLAKMAISGIV 150

  Fly    98 ATSANVTSQRLAGAKTL---NQQSVFAYGLFGLIFGGSVPHYFYTTVERLFSQDVRFRRFFLFLS 159
            .:..:..:|...| |.|   ::..|...||.|....||:.||:|...|.||.    |:.:::..:
plant   151 YSLGDWIAQCYEG-KPLFEFDRTRVLRSGLVGFTLHGSLSHYYYQFCEALFP----FQEWWVVPA 210

  Fly   160 ----ERLVYAPIYQALSLFFLALFEGKSPSTALKNVEKLYWPLLKANWQYLSVFVYLNFAYVPPM 220
                ::.|::.|:.::....|.|...:||:.....::..:.|:|.|.|:...:...:.:..:|..
plant   211 KVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTFLPMLTAGWKLWPLAHLVTYGVIPVD 275

  Fly   221 FRSISMAIISFIWVVYIAQKRRRFQDKLAAKE 252
            .|.:.:..|..|||..::.......:..|::|
plant   276 QRLLWVDCIELIWVTILSTYSNEKAEAQASEE 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7970NP_001303378.1 Mpv17_PMP22 177..238 CDD:461182 13/60 (22%)
AT4G03410NP_974505.1 Mpv17_PMP22 232..293 CDD:461182 13/60 (22%)

Return to query results.
Submit another query.