DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vta1 and VTA1

DIOPT Version :9

Sequence 1:NP_647640.1 Gene:Vta1 / 38204 FlyBaseID:FBgn0035251 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_013282.1 Gene:VTA1 / 850878 SGDID:S000004171 Length:330 Species:Saccharomyces cerevisiae


Alignment Length:324 Identity:78/324 - (24%)
Similarity:134/324 - (41%) Gaps:55/324 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VIAYWARLYALQVGLKASTQTGEETKLLLGIMDWLEQMKKQY-AENEA-------------ITNE 79
            :|.|:.:|||:::.|....::.|.|.|...::|.:|..||:. .|:||             |.::
Yeast    22 IIGYYLQLYAVELILSEEDRSQEMTALATELLDTIEAFKKEIGGESEAEDSDKSLHVMNTLIHDQ 86

  Fly    80 VAAQAHIENYALKLFLYADKQDREENFGKNVVKAFYS-----SGVLYDILQTFGELSEEALHNR- 138
            ..|:.::.|:.:.|:....||.::..:...:.::.:.     |.:|:...:...|.|..:|..| 
Yeast    87 EKAKIYMLNFTMSLYNEKLKQLKDGPWDVMLKRSLWCCIDLFSCILHLWKENISETSTNSLQKRI 151

  Fly   139 KYAKWKAAYIHNCLKNGE-------TPIPGPLPDDDDE----------AELEGENANASADTSPE 186
            ||.|   .|:.. |..||       |.......||.:|          ::||..|.:.....:|:
Yeast   152 KYCK---IYLSK-LAKGEIGSSDEKTLDYADFADDSEEIKDEDVDHQTSDLENNNNDKVEGLAPK 212

  Fly   187 DAAGAAAPAPYQPE--PDSQPPAPSSPTTSGVVPPTAEEVLNNPNKLPSPPVDEEKPGGFVPYVP 249
            |...:..|....||  .|    |.|.......|....:.:..:..::....||..:|.  .|..|
Yeast   213 DQTTSYEPVDEVPEFIDD----ADSVNEEEQTVDKNEDAITKDEQQVVKKEVDLTRPS--APSEP 271

  Fly   250 TAQPNPATAATIYQPIVPVAGVQITPDQMITAQKYCKYAGSALNYDDVKTAIENLQKALKLLST 313
            .|..:.:........|:..|      .::...||..|||.|||||:|:.||.:.|.|||.||::
Yeast   272 AAAEHKSYTKDELTKIMDRA------SKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNS 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vta1NP_647640.1 Vta1 18..148 CDD:398366 31/138 (22%)
Vta1_C 275..311 CDD:407932 17/35 (49%)
VTA1NP_013282.1 Vta1 10..161 CDD:398366 32/142 (23%)
Vta1_C 294..328 CDD:407932 18/33 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I1792
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102826
Panther 1 1.100 - - LDO PTHR46009
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1664
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.990

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