DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vta1 and EXT-like

DIOPT Version :9

Sequence 1:NP_647640.1 Gene:Vta1 / 38204 FlyBaseID:FBgn0035251 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_194405.1 Gene:EXT-like / 828782 AraportID:AT4G26750 Length:421 Species:Arabidopsis thaliana


Alignment Length:422 Identity:109/422 - (25%)
Similarity:174/422 - (41%) Gaps:120/422 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PCPPSLKSIQHFLKLAQEHDTRDVVIAYWARLYALQVGLK--ASTQTGEETKLLLGIMDWLEQMK 67
            |..|: :::..:|:.|.|....:.::||:.||||::.|||  .|.:|.....:|:.:::.||:.|
plant     4 PNEPA-RALLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNSILMSLINQLEKDK 67

  Fly    68 KQYAENEAITNEVAAQAHIENYALKLFLYADKQDREENFGKNVVKAFYSSGVLYDILQTFGELSE 132
            |      ::|.......|:|.:||.:|..||||||.........|.||::.:.::||..||.:..
plant    68 K------SLTLSPDDNMHVEGFALSVFAKADKQDRAGRADLGTAKTFYAASIFFEILSQFGPVPP 126

  Fly   133 EALHNRKYAKWKAAYIHNCLKNGETPIPGPLPDDDDEAEL-----EGENANASADT--------- 183
            :.....|||.||||.|...:|.|..|.||...|||.:..:     .|...::::||         
plant   127 DIEQKHKYAAWKAADIRKAIKEGRKPTPGDPVDDDTDLSIPSSGPSGSYDHSASDTNTTSHHRTE 191

  Fly   184 ------SPEDAAGAAAP-APYQPEP-------------DSQPPAPSS-PTTSGVVPPT------- 220
                  |.:|::....| .|..|.|             |..||.||| |:...:.|||       
plant   192 LDPPHDSNDDSSHHQFPEVPQHPLPPRFYDNPTNDYPADVPPPPPSSYPSNDHLPPPTGPSDSPY 256

  Fly   221 ------------------------AEEVLNNPNKLPS----PPVDEEKPGGFVPYVPTAQPN--- 254
                                    :.|  .:||.||:    |...|.......|:.|:...|   
plant   257 PHPYSHQPYHQDPPKHMPPPQNYSSHE--PSPNSLPNFQSYPSFSESSLPSTSPHYPSHYQNPEP 319

  Fly   255 --------PATAATIYQP--------------IVPV--------------AGVQITPDQMITAQK 283
                    ||.::|.:..              |.||              :..|..|:::..|.|
plant   320 YYSSPHSAPAPSSTSFSSAPPPPPYSSNGRINIAPVLDPAPSSAQKYHYDSSYQPGPEKVAEALK 384

  Fly   284 YCKYAGSALNYDDVKTAIENLQKALKLLSTGS 315
            ..::|..||.:|:|.||:|:|:|:|:||:..|
plant   385 AARFAVGALAFDEVSTAVEHLKKSLELLTNPS 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vta1NP_647640.1 Vta1 18..148 CDD:398366 44/131 (34%)
Vta1_C 275..311 CDD:407932 14/35 (40%)
EXT-likeNP_194405.1 Vta1 16..142 CDD:398366 44/131 (34%)
dnaA 248..>375 CDD:237605 19/128 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 84 1.000 Domainoid score I2870
eggNOG 1 0.900 - - E1_KOG0917
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 110 1.000 Inparanoid score I2071
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1450538at2759
OrthoFinder 1 1.000 - - FOG0006035
OrthoInspector 1 1.000 - - oto3194
orthoMCL 1 0.900 - - OOG6_102826
Panther 1 1.100 - - LDO PTHR46009
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4945
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

Return to query results.
Submit another query.